Staphylococcus lugdunensis N920143: SLUG_09540
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Entry
SLUG_09540 CDS
T01951
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln00260
Glycine, serine and threonine metabolism
sln00460
Cyanoamino acid metabolism
sln00630
Glyoxylate and dicarboxylate metabolism
sln00670
One carbon pool by folate
sln00680
Methane metabolism
sln01100
Metabolic pathways
sln01110
Biosynthesis of secondary metabolites
sln01120
Microbial metabolism in diverse environments
sln01200
Carbon metabolism
sln01230
Biosynthesis of amino acids
sln01240
Biosynthesis of cofactors
sln04981
Folate transport and metabolism
Module
sln_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SLUG_09540 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SLUG_09540 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SLUG_09540 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SLUG_09540 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SLUG_09540 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SLUG_09540 (glyA)
Enzymes [BR:
sln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SLUG_09540 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DUF3368
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CCB53420
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All DBs
Position
1003830..1005068
Genome browser
AA seq
412 aa
AA seq
DB search
MSYIEKQDKAIFDAIQSEYNRQNNNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEYVDVTETIAIERAKALFGAEHVNVQPHSGSQANMAVYLVALNMGDTVLGMNLSHG
GHLTHGSPVNFSGQFYNFVEYGVNEETELLDYEAIRQLAVQHQPKLIVAGTSAYSRTIDF
KKFKEIADEVGAKLMVDMAHIAGLVAVGLHPNPVPYADFVTTTTHKTLRGPRGGLILCKE
EYKKDIDKVIFPGIQGGPLQHVIAAKAVAFGEALNQNFKAYQQQVIDNARVLAETLQQEG
FRIVSGGTDNHLVAVDVKGSVNITGKEAESLLDSVGITCNKNTIPFDQEKAFVTSGIRLG
TPAVTTRGFDTDAIKEVALIMSLVLKNPNDAEKIKEATKRVSALTAKHPLYE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatcgaaaagcaagataaagccatttttgatgccatacaaagtgaatataat
cgtcaaaataataacattgaattaattgcctctgaaaattttgtttcagaagctgttatg
gaagcgcaaggttcagtgttgacgaacaagtatgctgaaggttatccagggcgacgttat
tatggtggttgtgaatatgtggatgtaactgaaacgatagcaattgaacgtgctaaagca
ttgtttggagccgaacatgttaatgtacagccgcattcaggttcacaagccaatatggca
gtatatcttgtagctttaaacatgggagatacagttttaggaatgaatttgagtcacggt
ggtcacttaacacatgggtctcccgtcaattttagtggtcaattttacaattttgttgaa
tatggtgtgaatgaggaaacagaattgcttgattatgaagcgattcgacaactcgcagtg
caacatcaacccaaattaatcgttgccggtacatcagcttattcaagaacaattgatttt
aaaaagttcaaagaaattgctgatgaagttggtgcaaaattaatggttgatatggcacat
attgcaggtctggtagctgttggtttgcatcccaatcctgtaccatatgcagattttgta
acaacaactactcataaaacattaagaggacctcgtggtggcttaatattgtgtaaggaa
gaatataaaaaagacatagacaaagtaatctttcctggtattcaaggtggcccattacaa
catgtcattgcggcaaaagccgtagcgtttggtgaagcattgaatcagaattttaaagca
tatcaacaacaagtgattgataacgcgcgtgttttggcagaaacattacaacaagaaggt
tttagaattgtgtcaggaggcacggataatcatttagttgcagtagatgttaagggctcg
gtcaacattactggtaaggaagccgaatcattactcgattccgttggtattacttgtaat
aaaaacacaatcccatttgatcaagagaaagcatttgtaacaagtggaatcagattaggt
acaccagcagtgacgactcgaggatttgataccgacgctatcaaggaagttgcactaatc
atgagtcttgtactaaaaaatcccaatgatgcagagaaaataaaagaagcaacaaaacgt
gtgagtgcattaactgctaaacacccgttgtacgaataa
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