Staphylococcus lugdunensis N920143: SLUG_10600
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Entry
SLUG_10600 CDS
T01951
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln03420
Nucleotide excision repair
sln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLUG_10600 (pcrA)
03430 Mismatch repair
SLUG_10600 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sln03400
]
SLUG_10600 (pcrA)
Enzymes [BR:
sln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLUG_10600 (pcrA)
DNA repair and recombination proteins [BR:
sln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLUG_10600 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SLUG_10600 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCB53531
LinkDB
All DBs
Position
1112139..1114331
Genome browser
AA seq
730 aa
AA seq
DB search
MNSLVANMNDEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLNEKGVSPYNILAITF
TNKAAKEMKQRVEQLVGEEASVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKNENIDSKKFEPRMFISAISNLKNELKTPDDAQKEANNYHEQMIATVYSGYQRQL
SRNEALDFDDLIMTTIRLFERVPDALEYYQNKFQYIHVDEYQDTNKAQYTLVKMLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKSIYLEQNYRSTKTILNAANEVIKNNT
ERKPKGLWTANTNGEKIKYYEAMTERDEAEYVVREVMKHQRNGKSYGDIAILYRTNAQSR
VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIVANSNDDISLQRIINVPKRGIGPS
SVEKIQAYALQNNISMFDALSEADFIGLSKKVTQGCIQFYDLLQNLIKEQEFLEISEIVE
EILEKTGYRAMLEREQTIESRSRLENLDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEAQIDDGVTMMTMHSAKGLEFPIVFLMGMEESLFPHIRAIKSDDDHDMQEERRICYVA
ITRAEEQLYITRATSRMLFGRSQSNMPSRFLEEIPEDLLELPNLDKRQTIAPKSKSMVKR
GYSKRVTSPKREVKSSDWHVGDKVIHKAWGEGMVSHVNEKNGSVELDIIFKSQGPKRLLA
QFAPIEKKED
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattagttgcaaatatgaacgacgaacaaagcgaagccgtgagaacgacagaa
gggccacttttgattatggctggtgctggctcaggtaaaacaagagtgcttacgcataga
attgcatatttattaaatgaaaaaggtgtttcgccatataacatactagcaattacgttt
accaataaagcagctaaagaaatgaagcaacgtgttgaacaattagtcggtgaagaagca
tcagttatctggatgtcaacatttcattcgatgtgtgtcaaaattttacgtagagatgct
gatcgcattggcatcgaacgaaattttactataatagacccgacagatcaaaaatcagtc
attaaagatgtattaaaaaatgaaaatattgatagtaaaaaatttgaaccacgtatgttt
atatcagcaataagtaatttaaaaaatgaattaaagacacccgacgatgctcaaaaagaa
gcgaataattatcacgaacagatgattgctactgtttatagtggttatcaacgacaatta
tctcgtaatgaagcgcttgattttgatgatttaattatgactacaatccggttatttgag
cgtgttccagatgcattagaatattatcaaaataaatttcaatatatccatgtagatgaa
tatcaagataccaataaagctcaatatacattagtgaaaatgttagccagtaaatttaaa
aatttatgtgtagtaggtgattcagaccaatcaatttatggttggcgtggcgcagatatt
caaaatatattatcttttgaagaagactatcctgaagctaaaagcatctatttagaacaa
aattatcgttcaacgaaaacaatacttaatgcagcaaatgaagtgattaaaaataatact
gaacgaaagcctaaaggactttggacagccaataccaatggtgaaaaaattaagtattat
gaggccatgaccgagcgagatgaagcagaatatgtcgtgcgcgaagtcatgaaacatcag
cgcaatggcaaaagctatggcgacattgcaattttatatcgtacaaatgcacagtcacgt
gtcctagaagaaacatttatgaaatcaaatattccttatactatggttggtggtcaaaag
ttctatgacagaaaggaaattaaagatttacttagttatttgagaatcgtagcaaatagt
aatgatgatattagtttacaacgtattatcaatgttccaaaaagaggtataggaccatct
tctgttgagaaaattcaggcatatgcattacaaaataatatcagtatgtttgatgcatta
tcagaagcggactttatcggactttctaaaaaagtaacacaaggatgtatacagttttat
gatttattacagaatttgattaaagaacaagaatttttagaaatcagtgaaattgtagaa
gaaatattagaaaaaacaggttatcgcgctatgttagaacgagagcaaacgatagaatca
cgcagtcgtttggaaaaccttgatgaatttatgtcagtgcctaaagactatgaagaaaat
acgccacttgaagaacaatctttaattaatttcttaacagatttatcattagtagcagat
attgatgaagcacaaattgatgatggcgtaacaatgatgacaatgcactcggctaaaggt
cttgaatttcctattgtatttttaatgggaatggaagaatcattattccctcatattaga
gcgattaaaagcgatgatgatcatgacatgcaagaagaacgacgaatttgttatgtggct
ataacacgtgcagaagagcagctttatattactagagctacaagtagaatgctgttcgga
cgctcacaatctaatatgccatcccgtttcctagaagaaatacctgaagatttattagaa
ttaccaaacctagataaacgtcaaaccattgcacctaagtcaaaatctatggtaaaacgt
ggctatagtaaacgagttacttctcctaagagagaggttaagtcatcggattggcatgtt
ggagataaggtcatacacaaagcatggggcgaaggtatggttagtcatgttaatgagaaa
aatggctctgtagaattagatattatatttaagtcacaaggtcctaaacgcttgttagct
caatttgcaccgattgaaaaaaaggaggattaa
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