Staphylococcus lugdunensis N920143: SLUG_12360
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Entry
SLUG_12360 CDS
T01951
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln03030
DNA replication
sln03410
Base excision repair
sln03420
Nucleotide excision repair
sln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLUG_12360 (polA)
03410 Base excision repair
SLUG_12360 (polA)
03420 Nucleotide excision repair
SLUG_12360 (polA)
03440 Homologous recombination
SLUG_12360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sln03032
]
SLUG_12360 (polA)
03400 DNA repair and recombination proteins [BR:
sln03400
]
SLUG_12360 (polA)
Enzymes [BR:
sln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLUG_12360 (polA)
DNA replication proteins [BR:
sln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SLUG_12360 (polA)
DNA repair and recombination proteins [BR:
sln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SLUG_12360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLUG_12360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
FadA
Motif
Other DBs
NCBI-ProteinID:
CCB53715
LinkDB
All DBs
Position
1307148..1309781
Genome browser
AA seq
877 aa
AA seq
DB search
MDKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAIYGFAMLLEKILKEEQPNHFLVAFDAG
KTTFRHEKYSEYKGGRQSTPPELSEQFPYIRQLLDAYHIKYYELENYEADDIIGTLSKQA
EASGLETIIITGDRDLTQLATDHVTIYYTKKGVTDVDHYTPEFIAEKYNGLLPKQIIDMK
GLMGDTSDNIPGVAGVGEKTAIKLLNQFHSVEGVYNHLDEVSGKKLKENLENSKADAFMS
KDLATINCDSPIKVNLKDTIMGDLNDNKDKIELFQKLEFKQLLNDIDSSASENNSETEHN
FEVIHHFDNINFKKLDNAIIHFEIDGSNYLKDKILKFGLYAQNQYIVISAEDIHQYTELI
EWLENDHNNKIVFDAKKTYVAAHRLEINLQHIDFDVMLASYIIDPSRTIEDVQSVVSYYN
QNFVKSDIAVYGKGKKRQVPLDDVLEVHIAAIMQAIYNCKPLMSDILSDHNQMDLLNNLE
LPLARILADMEETGIYTDVNDLKEMQNELQEKLDNLVSEIYEAAGESFNINSPKQLGIVL
FETLKLPIIKKTKTGYSTAVDVLEQLQGKHPIIDYILEYRQLSKLQSTYVEGLQKVISDD
QRIHTRFNQTLAQTGRLSSIDPNLQNIPIRLEEGRKIRKAFKPTSDDYVILSADYSQIEL
RVLAHMTQDESLKEAFIHGDDIHAATAMKVFGVEKDQVNDLMRRQAKAVNFGIVYGISDY
GLSQNLGITRKKAKAFIDDYLASFPGVKQYMTDIVKDAKANGYVETLLHRRRYIPDITSR
NFNLRSFAERTAMNTPIQGSAADIIKLAMVQFDKNVRETNYHAKLLLQVHDELIFEVPKS
EVQDFSEFVEEIMDNALTLAVPLLVDSSYGATWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
gtggataaattagttttaattgatggaaatagtttgagtttcagggcattttacgctttg
cctttgctgtcgaataaggctggtattcatacaaatgcaatatatggctttgctatgtta
ctagagaaaatattgaaagaagagcaacctaatcattttttagtagcatttgatgcaggt
aagacgactttcagacacgaaaaatatagtgaatataaaggtgggagacaaagtacgcct
ccagaattaagtgaacaattcccatatattcgacagttattagatgcatatcatattaag
tattatgaattagaaaattatgaggctgatgatattattggtacgttgagcaaacaagct
gaagcgtcagggttagaaacgattattattacaggagatcgtgatttaacacaattagca
acggaccatgtaacaatttattacacgaaaaaaggggttactgatgtagatcattacaca
ccagaattcattgctgaaaaatataatggattgttaccaaaacaaattattgatatgaaa
ggtcttatgggagatacttctgataatatacctggagtagctggtgttggagaaaaaacg
gcaattaagttacttaaccagtttcattctgttgaaggtgtgtataatcatcttgatgaa
gtttctggaaaaaaacttaaggaaaaccttgagaatagtaaagccgatgcgtttatgagt
aaagatttagctacaattaattgtgacagccctataaaagtgaatcttaaagatacaatt
atgggcgatttaaatgataataaagataaaattgagcttttccaaaaattagaatttaaa
caattacttaatgatatagacagtagtgctagtgaaaataacagtgaaactgaacacaat
tttgaagtgatccatcattttgataatataaattttaaaaagctagataatgcaatcata
cattttgaaattgatggtagtaattatttaaaggataaaattttaaagtttggattatat
gcacaaaatcaatatatcgttatttcggctgaggatatccatcaatatactgaactcatt
gagtggttagaaaatgatcataataataaaattgtttttgatgctaaaaagacttatgtt
gctgcacatcgtttagaaattaatctgcagcatattgattttgatgttatgttagcaagt
tatattattgatccatctcgtactatagaagatgttcaatccgtagtaagttattataat
caaaattttgtcaaaagtgatattgctgtatatggtaaagggaaaaaacgacaagttcca
ctagatgatgtgttggaagtgcatatcgctgccattatgcaagctatttataattgtaaa
ccattaatgtcagacattctgtcagaccataatcaaatggacttgttgaataatttagag
ttgccattagcgagaatacttgctgacatggaagaaacaggtatttatacagacgtaaat
gatcttaaggaaatgcaaaacgagcttcaagaaaaattggataatcttgtttcagaaata
tatgaagcagcaggtgaatcatttaatattaattcacctaaacaattgggcattgtttta
tttgaaacattaaaattacctattattaaaaaaacaaagacgggttattctactgcggtt
gatgtacttgaacagttacaaggtaaacatcctattattgattacattcttgagtatcga
cagttgtcaaaattacaatcaacatatgtagaaggcttgcaaaaagtcataagtgacgat
caacgtatccatacgcgttttaatcagacattagcgcaaactggacgtctttcatcaatt
gatccgaatttacaaaatataccgattcgtcttgaggaaggtcgtaaaattcgtaaagcc
tttaaaccaacgtcagatgattatgttattttatctgcggattattctcaaattgaactt
cgtgtattagcacatatgactcaagatgaaagtttaaaagaagcttttatacatggagac
gacattcatgctgctactgctatgaaagtgtttggagttgaaaaagatcaagttaatgat
ttaatgcgtagacaagcaaaagcggttaattttggcattgtttatggtataagtgattat
ggtcttagccaaaatttaggtattacacgtaaaaaagcaaaagcttttattgatgattat
ttggctagttttccaggtgttaaacaatatatgaccgatattgttaaagatgcaaaagcc
aatggttatgttgaaacgttattacatcgacgccgttatattccagatattacgagccgc
aactttaatttaagaagttttgctgaaagaacagccatgaatacgcctattcaaggtagt
gctgcagatattattaaattggcaatggtacaatttgataaaaatgtaagagaaacaaac
tatcatgccaaattattacttcaagtgcatgatgaattaatatttgaagttccaaagtct
gaggtacaagattttagtgaatttgttgaagaaattatggataatgcattaacacttgct
gtcccattgcttgtagattctagctatggagctacatggtatgatgctaaatag
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