Staphylococcus lugdunensis N920143: SLUG_12570
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Entry
SLUG_12570 CDS
T01951
Symbol
hemD
Name
(GenBank) uroporphyrinogen III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln00860
Porphyrin metabolism
sln01100
Metabolic pathways
sln01110
Biosynthesis of secondary metabolites
sln01120
Microbial metabolism in diverse environments
sln01240
Biosynthesis of cofactors
Module
sln_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SLUG_12570 (hemD)
Enzymes [BR:
sln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
SLUG_12570 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
Class_2_docking_dom
Antimicrobial19
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
CCB53736
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All DBs
Position
1331168..1331848
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AA seq
226 aa
AA seq
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MKPVVVMTQTSNVKSDLIEIVHKPFIKIQSLEFNTQLLHDNYDWIIFSSKNAVQLFYPFF
NSVNIKYVAAIGDKTAQLCQELGIKVDFIPDDYSQEGLISKLKLQNQKLLIPSSAQARPY
LQRKLSQNNKVVKIDLYTPIAHRDNIHEVIKLISNNKIDALTFSSSSAVHYFFEEANLPN
FYAYYAIGRQTANTIRYYGYEPKIADNQTLESLINKIIESRNYNEI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagttgtagtaatgacgcaaacgagtaatgtaaaaagtgatttgattgagatt
gtgcataaaccgtttattaaaatccaatcgcttgaatttaacactcagctattgcacgat
aactatgactggattattttttcttctaaaaatgctgtacaattattttatccttttttt
aatagcgttaatataaagtatgtagcagcgataggggataaaacagcacaactatgccaa
gaactaggtataaaagttgattttatacctgatgattattcccaagaaggacttatttct
aagttgaagttgcaaaatcaaaagcttctaatacctagtagcgcacaagcgcgaccttat
ttgcaacggaaactatcacaaaataataaggtagtaaagattgacttgtatacacctatt
gcacatagggataatatccatgaagtaattaagttgatatcaaataacaaaatcgatgca
cttacattttcaagttcttcagctgtgcattacttttttgaagaagctaaccttccaaac
ttttatgcttactacgcaattggccgtcagactgctaacacgattagatattatgggtac
gaacctaagattgctgataatcaaaccttagaatcattgataaataaaattatagaaagt
aggaattacaatgaaatttga
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