Staphylococcus lugdunensis N920143: SLUG_13530
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Entry
SLUG_13530 CDS
T01951
Name
(GenBank) putative helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sln
Staphylococcus lugdunensis N920143
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sln03019
]
SLUG_13530
03009 Ribosome biogenesis [BR:
sln03009
]
SLUG_13530
Enzymes [BR:
sln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SLUG_13530
Messenger RNA biogenesis [BR:
sln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SLUG_13530
Ribosome biogenesis [BR:
sln03009
]
Prokaryotic type
rRNA helicases
SLUG_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Cas3-like_C_2
AAA_30
AAA_19
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
CCB53835
LinkDB
All DBs
Position
1427035..1428423
Genome browser
AA seq
462 aa
AA seq
DB search
MSKHPFETFNLESTMLDAIKDLNFEKPTEIQNRIIPKILKRTNLIGQSQTGTGKSHAFLL
PLMHLIDIDLQEPQVIVVAPTRELAQQLYQATQHLAQFKSNVKVSLFIGGTDIEKDKQRT
HIQPQFIIGTPTRINDLAMSGHLHVHLASYLIIDEADLMIDLGLIDQVDQIAARLNDTSN
IAVFSATIPKSLHPFLNKYLNQPEFIVVDNQSQNKKNIEFYLIPTKGTAKVEKTLQLIDM
LNPYLCIIFCNSRENANELADSLNASGIKVGMIHGGLTPRERKQQMKRIRNLDFQFVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYRGVAITLYSPDDEHNISLIED
KGYQFETVDIKNNELQPVKSFNTRKKRERKDDHLTNEVKQKVRSKSKNKVKPGYKKKFKQ
QVEQMRSVKKENNIANDKIDRIEKQKRLGDSYAIRISCVNEW
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcatccatttgaaacatttaatttagaatcaaccatgctagatgcgattaaa
gatttaaattttgaaaagcctacggaaatacaaaatcgtattattcctaaaatattaaaa
agaacaaatttaatcggacaatctcaaactggtacaggtaaatcacacgcttttttattg
ccactcatgcatttaattgacatagatcttcaagagcctcaagtgatcgtggttgcacca
accagagaactagctcaacaactttatcaggctactcagcatttggcacaattcaaatca
aacgttaaggtttcattgtttatcgggggaactgacattgaaaaagacaaacaacgtacg
catatacaaccacaattcatcattggtacacctacacggattaatgatttagcaatgagt
ggtcatttacatgttcatttagcttcgtacttaattatcgatgaagcagatttaatgatt
gatttaggattaatagatcaagtagatcaaattgcagcgcgtctaaatgatacgtcaaat
attgcagtctttagcgcaactatacctaaatcactgcatccatttttaaacaaatatcta
aatcaaccagagttcatagttgtcgataatcaatctcaaaataagaaaaatatcgaattc
tatcttattccaacaaaaggtacagctaaagttgaaaaaacattacaattaattgatatg
ttaaatccttatttatgtattattttctgcaatagtcgtgaaaatgctaatgaattagca
gactctctaaatgcatctggcatcaaagtcggcatgatacatggaggtttaacaccgcgt
gaacgtaaacagcaaatgaaacgcattcgcaatttagacttccaatttgttattgcaagt
gatttagcttctcgtggaatcgatattgaaggtgtgagccatgttatcaattttgatgta
ccaaatgatatcgatttcttcacacatcgagttggaagaacaggacgaggtaattataga
ggcgtagctattacactatatagtcctgatgatgaacataatatttcattaattgaggac
aaaggttatcaatttgaaacggtcgatatcaaaaacaatgaattacaaccagtgaaatca
ttcaatacacggaaaaagcgcgaacgtaaagacgaccacttaactaatgaagtaaagcaa
aaagtacgtagtaaatctaaaaataaagtgaagcctggctataaaaagaaatttaaacaa
caggttgaacaaatgagaagcgtcaagaaagaaaacaatatagcaaacgacaaaatagac
agaatagaaaaacaaaaaaggttaggtgatagttatgctattaggatctcatgtgtcaat
gagtggtaa
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