Staphylococcus lugdunensis N920143: SLUG_16100
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Entry
SLUG_16100 CDS
T01951
Symbol
cvfA
Name
(GenBank) putative exported protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLUG_16100 (cvfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sln03019
]
SLUG_16100 (cvfA)
Messenger RNA biogenesis [BR:
sln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLUG_16100 (cvfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF3139
Motif
Other DBs
NCBI-ProteinID:
CCB54101
LinkDB
All DBs
Position
complement(1686636..1688195)
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AA seq
519 aa
AA seq
DB search
MNLLALLLILLGIILGVVVGYFVARNLLHQKQLQARQTADDIIGQGNKEAENIKKEKLLE
AKEENQILREQTESELRERRGELQKQEARLLQKEENLDRKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQSLIMKHEQELERISGLTQEEAVREQLQRVEEELSQDIAVLVKEKEAE
AKEKVDKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVDKARKEVDEIIRD
AGEQATFEMNIHNMHPELVKILGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELGEDVSLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENDTVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSEGYDGVEKAFAIQAGREIRVIVSPDEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattagccctcctactcattttgcttgggattattctaggagttgttgtaggg
tatttcgtagcccgaaatttgttgcatcaaaaacaattacaagcaagacaaaccgctgat
gatattattgggcaaggaaacaaagaagctgaaaatatcaaaaaagaaaagttacttgaa
gcaaaagaagaaaaccaaatcttaagagaacaaactgaatcagaattacgtgaaagacgt
ggtgagcttcaaaaacaagaagcccgacttcttcaaaaagaggaaaatttagatcgaaaa
tctgatctattagacaaaaaagatgagattttagaacaaaaagaatctaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaatcattaataatgaagcatgaa
caagaattagaacgcatctccggtcttactcaagaagaagctgttagagaacaacttcag
agagttgaagaagaactgtcacaagatattgcagtacttgttaaagaaaaagaagcagaa
gctaaagaaaaagtcgataaaactgccaaagaattattagctacaactgtccaaagatta
gcagcagatcatacaacagaatcaacagtatcagttgttaatttaccaaacgacgaaatg
aaaggtcgtattattggtagagaaggtagaaatattcgaacattagaaacattaacaggt
atcgatttgataattgatgatacaccagaagcagttattttatctggttttgatccaatt
agacgtgaaattgcaagaacagcattagtcaatttagtatcagacggtagaatccatcct
ggtagaattgaagatatggttgacaaagcaagaaaagaagttgacgaaatcattcgagat
gcgggagaacaagctacctttgaaatgaatattcataatatgcatcctgaattagtgaaa
attttaggtcgcttaaattatcgaacaagctacggtcaaaatgtgttgaaacattcgatt
gaagttgcgcatttatcaggtatgcttgctgctgaattaggtgaggatgtaagtttagcc
aaaagagctggcttgctccatgatgttggtaaagcaatagaccatgaagttgaaggtagt
cacgttgaaattggtgtagaactcgctaaaaaatacggcgaaaatgatacggtaataaat
gctattcattctcatcatggtgacgtggaacccacttctatcatatcaattttagtcgcg
gcagcagatgctttatccgctgcacgaccaggtgcacgtaaagagactttagagaattat
atccgcagattagaacgcttagaaacattatctgaaggttacgatggcgttgaaaaagca
tttgctatacaagccggacgagaaataagagtaatcgtttctccggatgaaattgatgat
ttaaaatcatatcgccttgcacgagatattaaaaaccaaatcgaagaagaacttcaatat
cctggtcatattaaagtgacagttgttcgtgagaccagagcagttgaatatgctaaataa
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