Staphylococcus lugdunensis N920143: SLUG_16250
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Entry
SLUG_16250 CDS
T01951
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sln
Staphylococcus lugdunensis N920143
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sln03016
]
SLUG_16250
Enzymes [BR:
sln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SLUG_16250
Transfer RNA biogenesis [BR:
sln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLUG_16250
Prokaryotic type
SLUG_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CCB54116
LinkDB
All DBs
Position
complement(1705109..1706026)
Genome browser
AA seq
305 aa
AA seq
DB search
MYNGILPVRKERGLTSHDVVFKLRKILQTRKIGHTGTLDPEVDGVLPVCIGIATRVSDYI
MDMGKTYHATVAIGTSTTTEDQTGDILEQKTINVGEITSEAIDSTLSQFQGWITQIPPMY
SSVKVKGKKLYEYARNGETVERPERKVEIKSIQRVSEIHFKQGMCLFDIDITCGKGTYIR
TLATDIGKALGFPAHMSRLTRTSSGGFNISDSLTIEQIKVLHEQEQLQEKLFPIEYGLKG
LPSIEIYNEDIKHRILNGQKFQKSMFSTVIQQQIVFIDGRTQQVLAIYISHPDKPKEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggtattttgcctgtacgcaaggaaagaggacttacaagtcatgatgtcgtc
tttaaattgagaaagatattacaaactaggaaaataggccacacgggcacacttgatcct
gaagttgatggtgtattgccagtttgcattggcatcgccactcgagtaagtgattatatc
atggatatgggaaaaacctatcatgctactgtggctatagggacaagtaccactactgaa
gatcaaactggagatatattagaacagaaaacaataaatgtaggagaaattacatcagaa
gcaattgactcgaccttgtctcaatttcaaggatggattacacaaattccacctatgtat
tcatcagttaaagttaaaggaaaaaagctttatgaatatgctagaaatggtgaaactgta
gagcgtccagaaagaaaagttgagataaaaagcatacaacgtgtttcagaaattcacttt
aaacaaggcatgtgcttatttgatatagatattacttgtggtaaagggacatatatacgt
acgcttgctacagatattggcaaagcattaggctttccagcacatatgtcacgccttact
cgaacatcatctggcggatttaatataagtgatagtttaactattgagcaaatcaaagta
ttgcatgagcaagaacagttacaagaaaagttgtttcctatagaatatggattaaaaggt
ctaccttctattgaaatatataatgaggacatcaagcatcgtatacttaatggacaaaag
tttcagaagtctatgttttctacagttattcaacaacaaattgtatttattgatggtagg
acacaacaagttttagctatctatatttcacatccagataagccaaaggaaattaaacca
aagaaagtttttaattaa
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