Shewanella loihica: Shew_0019
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Entry
Shew_0019 CDS
T00489
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
slo
Shewanella loihica
Pathway
slo00071
Fatty acid degradation
slo00280
Valine, leucine and isoleucine degradation
slo00310
Lysine degradation
slo00362
Benzoate degradation
slo00380
Tryptophan metabolism
slo00410
beta-Alanine metabolism
slo00640
Propanoate metabolism
slo00650
Butanoate metabolism
slo00907
Pinene, camphor and geraniol degradation
slo00930
Caprolactam degradation
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
slo01212
Fatty acid metabolism
Module
slo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shew_0019
00650 Butanoate metabolism
Shew_0019
09103 Lipid metabolism
00071 Fatty acid degradation
Shew_0019
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shew_0019
00310 Lysine degradation
Shew_0019
00380 Tryptophan metabolism
Shew_0019
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shew_0019
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shew_0019
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shew_0019
00930 Caprolactam degradation
Shew_0019
Enzymes [BR:
slo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shew_0019
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shew_0019
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shew_0019
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Shew_0019
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ABO21892
UniProt:
A3Q8U4
LinkDB
All DBs
Position
complement(21039..23189)
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AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSG
KDAFIVGADITEFLGLFAQDDNVLQGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET
ILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK
VGAIDAVVAPELLETAACQMLQDAISEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAVVEVIEKAALSERAEALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAAKQAQAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKLL
TAQINRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVGE
DAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETVASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEADRFGQKNGKGFYQYSVDRRGKP
KKEVDPLSYELLGNAFGEQKEFSSDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYLDTLGVANFVALADQYAHLGGLYQVTDKMRELAATNGSYYPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaagtggaattacttgaagacaatatcgctcggctc
tgttttaacgccgagggctcagtcaataagtttgatcgagagaccctcaactcccttaac
gacgcactcgatgccctagcacaaacccaaggggttaagggcctgatgctcacctcgggc
aaagatgcctttatcgtaggcgccgatatcacagaattcctgggactttttgcacaagac
gacaacgtgctacagggctggctggaagacgccaacaaggtgttcaacaagctcgaagat
ctgcccttcccaactatctcagccatcaaaggcttcgccctgggcggcggctgcgaaact
atcctagccactgacttacgtatcgccgatacctcggcgcgtatcggcctgccagagact
aagctgggcatcatcccaggctttggtggtacagtgcgtctgcctcgcgtgataggtgcc
gacaacgcacttgagtggatcaccacaggtaaagatcaacgcccggaagccgccctcaag
gttggcgccatcgacgccgtagttgctccagaattgctggaaacggcggcgtgccagatg
ctgcaagatgccatcagcgagaaaattgactggcaagcccgtcgtcagcgcaaactgtcg
ccgctgaccctgcctaagttggaagccatgatgtcatttgccaccgccaagggcatggta
ttcaaggttgccggtaaacactatcctgcgccaatggctgttgtcgaggtgatcgagaaa
gccgccttgagcgagcgcgccgaggcactacaggtagaacatcaagccttcatcaagctg
gccaagacagacgtggccaaggcacttatcggtatcttccttaacgaccaactagttaaa
ggcaaggccaagaaggcagccaaacaggcacaggcggttaactccgccgccgtgctgggc
gcaggcatcatgggtggcggtatcgcctaccagagcgcaagcaagggcacgcctatcgtg
atgaaagatatcaatcaggcggcactggatcttggcctcaacgaggcagccaagctgctc
acggcgcagatcaatcgtggtcgctctacaccagccaagatggcgggcgtgctcaacaac
atcacggcaaccctagactacaacgcacttaagcaagccgatgtcgttgtcgaagcagtg
gtcgagcatcctaaggtgaaggcgaccgtactggcggaagtcgagcaggtcgtgggcgaa
gatgccatcatcacctctaacacctccaccatctcaatcaatctgctggccaagagcctg
cagaaacctgagcgcttctgtggcatgcacttcttcaacccggtacacaagatgccactg
gttgaggtgatccgcggcgagcatagctcagaagagacagttgcctctgtcgtggcttac
gccgccaagatgggcaagacgcccatcgtggtcaacgactgcccaggcttcttcgttaac
cgtgtgctcttcccctacttcgccggtttcagcggcctgctagaagatggcgccgacttt
gctgccatcgacaaggtgatggagaagcaattcggttggcctatgggccccgcctaccta
cttgacgtagttggtctggacacgggtcatcacgcccaggccgttatggccgaaggcttc
cctgacagaatggctaaagaaggcaaagacgccatcgacgtcatgttcgaagccgatcgt
ttcggtcagaagaatggcaaaggcttctaccaatattcggtggatcgtcgtggcaagcct
aagaaagaggtcgacccactcagctatgaactactgggcaacgccttcggtgagcagaag
gagttcagcagtgacgagatcatcgcccgcaccatgatccctatgatcatcgaaacggtt
cgttgtctggaagaaggcatcatagccacgccggccgaagccgatatgggactcgtttat
ggactcggtttccctccattcagaggaggtgtgttccgctacctagacaccttaggtgtc
gctaacttcgtcgcccttgccgatcagtacgcccacctgggtggcctgtatcaggtaacc
gacaagatgcgtgaactggctgccaccaacggcagttactacccagcctaa
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