Shewanella loihica: Shew_0049
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Entry
Shew_0049 CDS
T00489
Name
(GenBank) choline/carnitine/betaine transporter
KO
K03451
betaine/carnitine transporter, BCCT family
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
Shew_0049
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Gene cluster
GFIT
Motif
Pfam:
BCCT
DUF5472
Motif
Other DBs
NCBI-ProteinID:
ABO21922
UniProt:
A3Q8X4
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Position
59401..60972
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AA seq
523 aa
AA seq
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MTKGIDKYSIESTDYTIGQDNVQKWGFDVHNPVFGVSAGLIAAFLLATLLTDAETAKSVL
DGIKWKIIGAFDWLFIWSGNIFVIFCLGLILSPYGKIRLGGNEATADYSFLSWLSMLFAA
GMGIGLMFWSVAEPVAYFTGWYETPLGVEPNTPEAAKLALGATMFHWGLHPWAIYGVVAL
SLAFFTYNKGMPLSIRSIFYPLLGDRAWGWAGHIVDILAVLATLFGLATSLGLGAQQAAS
GIHHVFGIEASLGLQMIVIVAVTLLAVVSVVRGIDGGVKVISNINMIVAFLLLILVAMIG
YAVSLGSIPTTLMAYVENIIPLSNPHGRTDEAWFQGWTVFYWAWWISWSPFVGMFIARVS
KGRTVREFITAVLLVPTAVTLIWMSVFGGMAIDQVVNKVGELGAKGLTDVPLAMFEMFDV
LPFGTLLSIIAVVLVLVFFITSSDSGSLVIDSITAGGKIDAPVPQRVFWALLEGAIAMAL
LWIGGTEAIQALQAGAISTALPFTVILLLMCVSLLKGMRTERF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaggtattgataaatacagcattgaaagcaccgactatacgatcggccaggac
aatgtgcagaagtgggggttcgacgtacacaaccccgtatttggggtgagtgccgggcta
attgccgccttcctgctggcgaccctgttgaccgatgccgagacggccaagtccgtgctc
gatggcattaagtggaagattatcggcgccttcgattggctgtttatctggtcggggaat
attttcgtgatcttctgcctgggcctgatcctctcgccctacggcaagatacgtctcggc
ggcaacgaagccactgcggactactccttcctctcctggctatctatgttatttgccgcc
ggtatggggataggcctgatgttctggagtgtggccgagcccgtggcctactttaccggt
tggtatgagacgccgctcggggtcgaacccaacacgccggaggcggccaagttggcgttg
ggggccaccatgttccattggggtctacacccctgggccatctatggtgtcgtggcgctg
tcgttggccttcttcacttataacaagggtatgcctctctccatccgctccatcttctac
cccctgctaggtgacagagcctggggctgggcgggacatattgtcgatatccttgccgtg
ctggcgaccctgtttggtctggcaacctcgctaggactcggcgctcagcaggcggccagc
ggtatccaccatgtgtttggtatagaggccagcctggggctgcagatgatagtgatcgtc
gccgtgaccctgctggcagtagtgtccgtggtacggggtatcgacggcggcgttaaggtg
atcagtaatatcaatatgatagtcgctttcctgctgctgatcctggtggccatgatcggc
tacgccgtcagcttgggcagcattcctaccaccctgatggcctacgtggagaacattatt
ccgcttagtaatccacacgggcgcaccgatgaggcctggttccagggctggacagtattc
tactgggcctggtggatctcctggtcaccattcgtgggcatgtttatcgccagggtttct
aaggggcgtaccgtgcgtgagttcatcaccgcagtgctgctggtacctacggctgtgact
ctgatctggatgtcggtatttggtggcatggcgatcgatcaggtagtcaacaaggtgggt
gagctgggtgccaaggggttgaccgacgtgccgctggccatgtttgagatgttcgatgtg
ctgccgttcggcacactgctctcaatcatcgccgtggtgctggtattggtgttcttcatc
acctcgtcggactcgggttcactggtgatcgacagcatcaccgccggcggtaagatagac
gcgcctgtgccacagagggtgttctgggcgctgctcgagggtgcaattgccatggccctg
ctgtggatcggtggtacagaggcgattcaggccctgcaggccggcgccatctcgaccgcg
ctgccctttaccgtgatacttctgctgatgtgtgtcagcctgctcaaggggatgcgcacc
gagcgcttctaa
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