Shewanella loihica: Shew_0060
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Entry
Shew_0060 CDS
T00489
Name
(GenBank) 4Fe-4S ferredoxin, iron-sulfur binding domain protein
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
slo
Shewanella loihica
Pathway
slo00630
Glyoxylate and dicarboxylate metabolism
slo00680
Methane metabolism
slo01100
Metabolic pathways
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shew_0060
09102 Energy metabolism
00680 Methane metabolism
Shew_0060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_7
Fer4_11
Fer4
Fer4_9
Fer4_10
Fer4_6
Fer4_2
Fer4_21
Fer4_8
Fer4_3
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
ABO21933
UniProt:
A3Q8Y5
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All DBs
Position
72749..73339
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AA seq
196 aa
AA seq
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MAVMKFLCDTKRCIECNGCVTACKNENDSALEWGIQRRRVVTINDGQPGEASISVACMHC
TDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAPQFPKKSTFGSRGKMDK
CTFCAGGPEETFSEAERKKYGANRLAEGKLPMCAELCSTKALLAGDAEVVSNIYRERIAA
RGNPNAIWGYTPKTGV
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcatgaaatttctatgtgacaccaaacgctgcatcgagtgtaacggttgcgtc
acagcatgtaagaacgaaaacgattccgctctcgagtggggtatccaacgccgtcgcgtc
gtgaccatcaacgatggtcaacccggtgaagcctcgatctctgtggcttgtatgcactgt
accgacgccccttgtcaggccgtttgcccagcaaactgcttctacaagacggaagatggc
ctaacactacacaacaaagatacctgtatcggttgtggttactgcctatacgcctgccca
ttcggtgcgcctcagttccctaagaagagcacctttggcagccgcggcaagatggacaag
tgtactttctgtgccggtggcccagaagagaccttctccgaagccgagcgtaagaagtat
ggcgctaaccgtctggccgagggtaagttacctatgtgtgccgagctttgttcaaccaag
gcactgctcgctggtgatgcggaagtggtttccaacatctaccgtgagcgtattgcggcc
cgtggtaaccccaatgcgatctggggctacacccctaagactggcgtttaa
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