Shewanella loihica: Shew_0107
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Entry
Shew_0107 CDS
T00489
Name
(GenBank) MATE efflux family protein
KO
K26937
MATE family, multidrug efflux pump
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0107
Transporters [BR:
slo02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
Shew_0107
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Paralog
GFIT
Motif
Pfam:
MatE
DUF6338
YrhC
Motif
Other DBs
NCBI-ProteinID:
ABO21979
UniProt:
A3Q931
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Position
complement(117145..118491)
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AA seq
448 aa
AA seq
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MSPLNLLLNKQKNSQLFALAVPMILSNITVPLLGLVDTAVVGHLSNAYYLGGVAVGSTVI
TLILWILGFLRMSTTGLVAQAFGAKELHTQYRLLMQSASLALLLSLLVLLLQQPIITAAM
ALSDASEQVQYYSQAYFNIRIWSTPFALVNLALLGWLLGRQQPKAAMWQLIAANLTNILL
DLLFVIGLGWGVEGAALASVLADMTGFAVAASMVVRTIKREGGFEFLPLLRSLSLNSYQR
LVRLNLDIFIRSLCLQLAFAFMTFQGANLGDNTVAANAVLLNLLLLISYALDGIAYYGEA
EVGRAVGEKSHQRMTQSVTLAGLWSAIFALLFTLFFALWGEQIIKLLTNISEVRQEALAY
LGWVVALPLLAFGSYLFDGVYIGAAQGKAMRNTMILATFGVFFPTWLLLQDYGNHALWAA
MSLFMVTRSLSLALDYRYRLSKTLTKTG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccactaaacttattgttaaataaacagaaaaacagccagttgttcgcgctcgcc
gtgcctatgatcctgtctaacattacggttcccctgctggggctggtcgatactgccgtc
gtgggacatctgagtaacgcctattatttagggggagtcgccgtcgggtcaacggtgatc
accctgattttatggattctgggcttcctgcgcatgtcgactacggggcttgtggcacag
gccttcggcgccaaggagcttcacacccaataccgtttattgatgcagtcggccagcctg
gcgctgctgctttccctgctggtgctactcctgcagcaacccataatcaccgcggcgatg
gcactctccgacgccagcgagcaggtgcagtattacagccaggcctattttaacatccgc
atctggtcgacccccttcgccctggtcaacctggccctgctgggttggctgctggggcgc
cagcagcctaaggccgccatgtggcagctcatcgccgccaacctcactaacatacttttg
gatctgctattcgtaatcggacttggctggggcgtcgaaggagccgctctggcctctgta
ctggcggacatgacgggctttgccgttgccgccagcatggtggttcgcaccatcaagcga
gagggaggtttcgagttcctgcctctacttcgcagcctgtcgctcaatagctatcagcgc
ctggtgcgcctcaatctggatatctttatccgcagcctctgcctgcaactcgccttcgcc
ttcatgacctttcagggagctaacctgggcgacaatacggtggccgccaacgccgtgctg
ctcaaccttttgctgctcatctcttacgccttggatggcatcgcctattatggtgaggcc
gaggtgggccgagccgtgggcgaaaagagccaccagcgcatgacccagagcgtcactctg
gccgggctctggtcggccatctttgccctgttgtttaccctgttttttgccctttggggc
gagcagatcatcaagctgctgaccaatatctctgaggtgcgccaggaggccctggcctac
ttgggctgggtggtcgccctgccgctactcgccttcggctcctacctgttcgacggcgtc
tatatcggcgccgcccaaggcaaggcgatgcgcaacaccatgatactcgccaccttcggg
gtcttcttccccacatggctactgttgcaggattatggtaaccatgccctgtgggccgcc
atgagcctgtttatggtgacccgcagcctcagcctggcactggactaccgctatcgattg
agtaagaccctaacgaaaacgggatga
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