Shewanella loihica: Shew_0117
Help
Entry
Shew_0117 CDS
T00489
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
slo
Shewanella loihica
Pathway
slo00190
Oxidative phosphorylation
slo00860
Porphyrin metabolism
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
slo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Shew_0117
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Shew_0117
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slo01006
]
Shew_0117
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
slo03029
]
Shew_0117
Enzymes [BR:
slo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
Shew_0117
Prenyltransferases [BR:
slo01006
]
Compound prenylation
Protoheme farnesyltransferase
Shew_0117
Mitochondrial biogenesis [BR:
slo03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Shew_0117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
ABO21989
UniProt:
A3Q941
LinkDB
All DBs
Position
complement(128380..129282)
Genome browser
AA seq
300 aa
AA seq
DB search
MAKPMTITKPVATPLPWRAYLEMTKPRVVALMLLTVLVGMCLAVPGAVPVQPLIAGLVGI
GMMAGAAAAYNHLIDRRIDGLMARTYNRPLPKGRISITKALTFATAMAILGFALLYWAVN
PLTAWLTFASLIGYAVIYTAYLKRATPQNIVVGGLAGAMPPLLGWTAITGEFHGHALLLV
IIIFAWTPPHFWALAIHRRAEYAKVDVPMLPVTHGVEFTKTCIMLYTVLLALACLYPVLV
GMCGPLYLVGSTLLSCGFIYKAWQLKYRDKPGLAMQVFRFSIYHLMLLFLLLLVDHYLWS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacctatgacaatcactaagcctgtcgccaccccgctcccttggcgcgcctac
ctcgaaatgaccaagcctagggtggttgccctgatgctgctgaccgtattggtcggcatg
tgtctggcggtgccaggcgcggtaccggttcagccgctgatcgccggcctggtgggcata
ggcatgatggcgggggccgctgcggcctataaccatctgatcgaccgccgcatcgacggc
ctgatggcccgcacctataaccgtccgctccccaaaggccggatctctatcaccaaggcg
ctcacctttgccaccgccatggcgattctcggctttgcgctgctctactgggccgtcaac
ccgctcaccgcctggctcaccttcgccagtctcatcggctacgcggtgatctataccgcc
tatctcaagcgcgcgacaccccagaatatcgtcgtcggcggcttggccggcgccatgccc
cccctactgggttggacggcgatcaccggtgagtttcacggccatgccttgctgctggtg
atcatcatcttcgcctggaccccgccccacttctgggcgctggcgatccacagacgcgcc
gaatatgccaaggtcgatgtgcccatgctgcccgtcacccacggcgtcgaatttaccaag
acctgcatcatgctctatacggtgttgctggcgctggcctgcctctaccctgtgctggtc
ggcatgtgcggtcccctttatctggtggggtcgactctgttgagttgcggcttcatctat
aaggcctggcaactcaagtatcgagacaagccgggcctggcgatgcaggtgtttcgcttc
tccatctaccatctgatgctgctcttcttgctgctcctagtcgaccactatctctggagc
taa
DBGET
integrated database retrieval system
