Shewanella loihica: Shew_0192
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Entry
Shew_0192 CDS
T00489
Name
(GenBank) TPR repeat-containing protein
KO
K02200
cytochrome c-type biogenesis protein CcmH
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Shew_0192
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_CycH
TPR_CcmH_CycH
TPR_2
TPR_1
TPR_19
TPR_20
TPR_8
TPR_7
TPR_14
TPR_16
TPR_17
TPR_9
ANAPC3
TPR_12
TOM20_plant
TPR_11
Cortex-I_coil
TPR_10
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ABO22064
UniProt:
A3Q9B6
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Position
complement(197601..198851)
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AA seq
416 aa
AA seq
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MTTLWIFIALFVLVSLVLIWFPHFRQQKMLQAEEAGVRKATNLELFNNRLATLEKELEDE
LLDQDEFNALKKELEISLLQDMKQGEDESLVGQIKPKSLLWPTLMSVVVLGVSGYFYANL
GAYANLDKAVPDNPHAGMDAAQIMTQRIQMMESQLQAEPENSQLLFSLGHAYISANRYDD
AVKAFDKAMELVGTHAELLGPKATAMYYKANQRITPAVQAIIDQSLALDPEDPSTLLLVG
MDAFFSAQYKKAIDAWQIILDSDRSDVDRSAIINAIESAKMRMQAETGEMPNDATHQQAK
ATTGKTVTIDVSIAPELLENVSGSDMLFIFARNTQGPKVPLAATKVSAKSLPVSITLDDS
TGMGGDIKLSDAKQVEVIAVLSKHGSVKAQPGDLQGRLETMDVGSTAKLVIDTLVQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactctggatttttattgcgctttttgtattagtcagccttgtgctgatttgg
tttccacacttccgccagcaaaagatgctgcaggccgaagaagccggtgtgcgtaaggcc
accaacctcgaactttttaacaatcgcctagcgaccctagagaaggaacttgaggatgag
ctgctggatcaagatgagtttaacgcgctaaagaaagaactcgagatcagcctgcttcag
gacatgaagcaaggtgaagatgaatctctggtcggtcagatcaagcctaagagcctactc
tggccaacattgatgtctgtggtggtattaggtgtttctggctacttctatgccaaccta
ggtgcgtatgccaacctagacaaggcggttcccgacaatccacacgcaggaatggatgcc
gcccagatcatgacccagcgcattcagatgatggaatcacagctgcaagccgagccggaa
aacagccagctgctgtttagccttggccatgcctacatcagcgccaaccgttatgatgat
gcggtaaaagcattcgacaaggcgatggagctagtgggtacccacgccgagctgcttggt
cctaaggcgacagccatgtactacaaggccaaccaaagaatcacccctgcggtacaggcc
attatcgaccaatcattggcattagatcctgaagatccttcaaccctactgcttgtcggt
atggatgccttcttcagtgctcaatataagaaggcgatcgatgcctggcagatcattctc
gatagcgacagaagcgatgtggaccgtagcgccatcatcaatgccatcgagagcgccaag
atgagaatgcaagccgaaactggcgagatgcctaacgacgcgactcatcagcaggccaag
gccactaccggtaagacggtaaccatagatgtgtcaatcgcacccgagctgctagagaat
gtcagcggtagcgatatgctgtttatctttgcccgcaacacccaaggccctaaggtgccg
ctagcggcgactaaggtatcggcgaaatctctgcctgtctctatcaccttagatgacagc
actggcatgggcggcgatatcaagctgagcgacgccaaacaggttgaagtgatcgccgtg
ctctctaagcatggttcggttaaggcgcagcctggcgatctacagggccgtctggaaacc
atggacgtggggtcaaccgctaagctagtgattgatactctggttcagtaa
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