Shewanella loihica: Shew_0228
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Entry
Shew_0228 CDS
T00489
Name
(GenBank) Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slo03009
]
Shew_0228
Enzymes [BR:
slo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Shew_0228
Ribosome biogenesis [BR:
slo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Shew_0228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Swi5
Motif
Other DBs
NCBI-ProteinID:
ABO22100
UniProt:
A3Q9F2
LinkDB
All DBs
Position
241543..242385
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AA seq
280 aa
AA seq
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MDLSVALYIVPTPIGNLGDISSRALEVLNQVSLIACEDTRHSGKLLSHFGIETRKTALHD
HNERDRAQGIIQKLANGESVALISDAGTPLISDPGYHLVSQVREAGFKVVPLPGPCAAIT
ALSASGLPSDRFSFEGFLPAKEKGRLDKLTELKEDPRTLIFYESPHRIVHSLTSIVAALG
GDRQVVMAREVTKTFETFLSGPAAEVLATVSEDPNQQKGEIVLMCHGHRTDEDAGVPAQA
LETLKLLSQELPLKKASALAAQIHGLKKNALYKLGLELDL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtcggtcgcactttacatagttcctactccaatcggtaaccttggagatatc
agcagccgcgccctagaggtattgaatcaggtatcccttatcgcctgtgaggacacccgc
catagcggtaaattgctgagccatttcggcatagagacccgcaagacggcgctgcatgat
cacaacgaacgcgaccgggctcaggggatcatccagaagctggccaatggtgagtctgtg
gcgctgatctccgatgccggtacgccgttgatctccgatcctggctatcatctggtgtca
caggtgcgtgaagccggtttcaaggtggtgccgctgccgggcccctgtgcggctatcacg
gcgctgagcgcctctgggctgccgtcggatcgcttctcgttcgagggctttctgcccgcc
aaggagaagggacgtctcgataaactgaccgaactgaaagaagatcctcgcaccctgatc
ttctacgagtcgccacatcgcatcgttcacagcctaacctctatcgtggcggcgcttggc
ggcgatcgtcaggtggtgatggcccgtgaagtcaccaagaccttcgagaccttcctctct
ggccccgccgctgaggtgcttgcgacagtgagtgaggatcccaaccagcagaagggcgaa
attgtgctcatgtgccacggacatcgcacagatgaagatgccggcgtgcccgcccaggcg
ctggagacgctaaagttactgagtcaggagctaccgctgaagaaggcatcggcgctggcg
gcgcagatccatgggctgaagaagaacgccctctataagctgggcctagagctggatctc
tag
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