Shewanella loihica: Shew_0239
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Entry
Shew_0239 CDS
T00489
Name
(GenBank) formate dehydrogenase gamma subunit
KO
K00127
formate dehydrogenase subunit gamma
Organism
slo
Shewanella loihica
Pathway
slo00630
Glyoxylate and dicarboxylate metabolism
slo00680
Methane metabolism
slo01100
Metabolic pathways
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shew_0239
09102 Energy metabolism
00680 Methane metabolism
Shew_0239
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Gene cluster
GFIT
Motif
Pfam:
Ni_hydr_CYTB
Motif
Other DBs
NCBI-ProteinID:
ABO22111
UniProt:
A3Q9G3
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Position
complement(255646..256626)
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AA seq
326 aa
AA seq
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MSKAIRWLSLIVLGLFASSYALAEETATLQPQQWQTIQEHAISGDIPEIRGLPTQPELLM
PASIPQQADESLLGYLGATDTIAFALFASLFGVTALFILFVVVNGVSKLDHGFSGKLIKR
WSGLSVSVHWLGAIPCILLILTGLVLGGGRFYFEPGMNAGSWSALVGLSSSLHELMAFPF
ILGYVLMVLMWAPKQFPASYDLKWFAVLGGYINFGKKQHPDAGFANAGEKLWFWVFALFG
GVMVVSGLAMMFPETYGVTKNTANLMLVLHIASTVIISAFSVVHIFMATVMSEGGMSNMT
SGYCDENWAKQHHNLWFADLKKAGKV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcaataagatggttaagccttattgtgctcggtctgtttgcatccagttat
gcactggccgaagagaccgccaccctgcagccgcagcagtggcaaaccattcaggagcac
gccatctctggtgatattcctgagatccgtggcctaccgactcagcctgagctgctgatg
ccagcgtcgattccacagcaagccgacgagtcgctgctgggctacctgggcgcgaccgat
accatcgccttcgccctgtttgccagcttgtttggcgtaaccgccctcttcatcctattc
gtggtggtgaacggcgtctctaaactggaccatggcttctcgggtaagctgatcaagcgt
tggtcaggccttagcgtcagtgtgcactggctgggtgccatcccttgcatcctgctgatc
ctcaccggcctggtgctcggcggcggccgcttctacttcgagcctggcatgaacgcgggt
tcctggtcggccctggtgggcctatccagcagcctacatgagttgatggccttccccttc
atcctcggctatgtgctgatggtactgatgtgggcgcctaagcagttccccgcaagctat
gacctgaaatggtttgccgtactgggcggctacatcaacttcggcaagaaacagcatccc
gatgcgggctttgccaacgcgggtgagaagctgtggttctgggtattcgccctgttcggc
ggtgtcatggtggtctctggcctggcgatgatgttccccgagacctatggcgtcaccaag
aacacggccaatctgatgctggtattgcatattgcctcaaccgtcatcatcagcgccttc
tctgtggtgcatatcttcatggcgaccgtgatgtccgaaggcggcatgtcaaacatgacc
tctggctactgtgacgaaaactgggccaaacagcatcacaacctctggttcgccgacctg
aagaaggctggcaaggtttaa
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