Shewanella loihica: Shew_0309
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Entry
Shew_0309 CDS
T00489
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0309
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_0309
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
ABO22181
UniProt:
A3Q9N3
LinkDB
All DBs
Position
complement(335256..335861)
Genome browser
AA seq
201 aa
AA seq
DB search
MKALLIILSVALLGGCASRDIVTMDTPTNQVFDLNDKDKDGVIVARERCNDTVLGATIDN
YGCGKIKPINERQELKILFANDSYYIDPQYYDQVEVVATFMRQYPNTKVTIEGHCSKTGS
YEHNLALSQNRADAVTSLLSERFGIASDRLTAIGYSYDRPVDPTHTKMAHTRNRRVIAEV
TGEDTKADMKWTIYTVDEQVK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttactgattattctaagcgtcgccttactgggcggctgcgcttcgcgcgac
atagtaaccatggataccccgaccaatcaggtattcgatcttaacgacaaagataaagat
ggcgtcatcgtcgcccgtgagcgctgtaacgacacagtgctaggtgccaccatagacaac
tacggctgtggtaagattaagcctatcaatgagcgtcaagaacttaagatattgtttgcc
aacgattcttactacatagatcctcagtactatgatcaggtagaagtggttgcgactttc
atgagacagtaccccaacactaaggtgaccatcgaaggtcactgtagtaagacgggtagc
tatgagcacaacctagcgctgtcgcaaaaccgcgccgacgccgtgacctcgctgttgtct
gagcgattcggtatcgccagcgatcgtctgacggccataggctacagctacgacagaccg
gtagatcctactcataccaagatggcacacacacgtaaccgccgcgtgatcgcagaggta
acgggtgaagataccaaggccgatatgaagtggaccatctacacagttgatgaacaagta
aaataa
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