Shewanella loihica: Shew_0325
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Entry
Shew_0325 CDS
T00489
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_0325
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Shew_0325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
DUF3435
RMI1_N_N
Peptidase_M19
Motif
Other DBs
NCBI-ProteinID:
ABO22197
UniProt:
A3Q9P9
LinkDB
All DBs
Position
371031..371924
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AA seq
297 aa
AA seq
DB search
MSDDWVQEFVSYLVSERQLSPHTVRNYRFELERVGELLPENFIWAEVSDEQLQAVLNKLH
RKGLGPRSIALTLSALKQFCHYLLQEGYIKKDPCLNLSAPKQQKPLPKNMDLDSVTHLLS
IEGDDALALRDKAIMELFYSSGLRLAELAALDTRDIASGEHQVKVMGKGSKERIVPIGRM
ALSAIDDWLKVRSLLPCEDDALFVTAKGKRLAHRSIQARLNKWGQLQGLNARVHPHKLRH
SFATHMLESSADLRAVQELLGHANLSTTQVYTSLDFQHLAKVYDGAHPRAKKRGGNG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgactgggtgcaggaatttgtctcatatctggtcagtgagcggcagctctct
ccccacacggtcagaaactatcgcttcgagctcgagcgggtcggcgaactcctccccgag
aattttatctgggcagaggtcagcgacgaacagctgcaagccgtgctcaataagctgcac
cgcaaggggctggggcctcgctccatcgccctgacgctgtcggccctcaagcagttttgt
cattatctgctgcaagagggctatatcaaaaaagatccctgcctgaacctcagcgccccc
aaacagcaaaagcccctgcctaagaatatggatctcgattccgtgacccatcttctgtct
atcgagggggacgatgcgctggcgttgcgggataaggcgatcatggagctgttctactct
tctggcttgcgtctggccgagctggcggccctggatacccgagatatcgccagcggcgag
catcaggtcaaggtcatgggtaagggcagcaaggagcgtatcgtacccattggccgcatg
gcactgagtgccatcgacgactggctcaaggtgcgctcgcttttgccctgtgaagacgac
gccctgtttgtcaccgccaagggcaaacgcctcgcccacaggagcatacaggccaggcta
aacaagtggggtcagctgcaggggctaaatgcccgggtgcatccccataagctgcgccac
tcctttgcaacccatatgctggaatctagcgcggatctcagggcggtgcaggaactgctg
gggcatgccaacctgtcgacgactcaggtctacaccagcctggacttccaacacctagcc
aaggtctacgacggcgcccatcccagggcgaagaagcggggtggtaatggttag
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