Shewanella loihica: Shew_0370
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Entry
Shew_0370 CDS
T00489
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
slo
Shewanella loihica
Pathway
slo00190
Oxidative phosphorylation
slo00860
Porphyrin metabolism
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
slo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Shew_0370
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Shew_0370
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slo01006
]
Shew_0370
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
slo03029
]
Shew_0370
Enzymes [BR:
slo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
Shew_0370
Prenyltransferases [BR:
slo01006
]
Compound prenylation
Protoheme farnesyltransferase
Shew_0370
Mitochondrial biogenesis [BR:
slo03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Shew_0370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
ABO22242
UniProt:
A3Q9U4
LinkDB
All DBs
Position
418183..419109
Genome browser
AA seq
308 aa
AA seq
DB search
MIRHSTSTQVAAPLGAYLQVTKPGIIMGNLIAVVGGFLLAARGEVDAVLMLATLVGLSLV
VASGCAINNYIDRDIDAKMQRTCRRATVTGAIPLKQVLGLGIALGVLGFGLLAWFTNLAA
LLFAAFGYLVYVGLYSLYMKRNSVYGTLVGSLSGAVPPVVGYCAVTGRMDGAALILLAMF
SLWQMPHSYAIAIFRFKDYEAANIPVLPVAQGVEKAKLHIVFYIALFALVSTLLPLAGYT
GVGFMAVSCVTSFWWLLMALKGYRSDVNLLRWSRQVFGFSILTIAILSLTMALDFQVAGQ
APLLAMLG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattaggcattcgacctcaactcaggtggccgcgcccttgggggcttatcttcaggtg
accaaacccgggattatcatgggaaacctcatcgccgtggtgggcgggtttctcctggct
gccaggggggaggtcgatgccgtcttgatgctggcgacgctggtggggctctctctggtg
gtggcctcaggctgcgccatcaacaactatatcgaccgggatatcgacgccaagatgcag
cgcacctgccgtagggcgacggtgaccggcgctatcccacttaagcaggtacttggctta
ggcatagccctgggcgtactcggctttggcctgctggcctggtttaccaacctggcggcc
ttgctgtttgccgccttcggctacctggtttacgtggggctctacagcctctacatgaag
cgcaactccgtctatggcaccctggtcggcagcctctcgggcgccgtgccgcccgtggtg
ggttactgcgccgtgaccggcaggatggatggcgctgcgctgatcctgctggccatgttc
agcctgtggcagatgccgcactcctatgccatcgccatctttcgctttaaggactatgag
gcggccaatattcctgtgctgcctgtggcccaaggcgtagaaaaggccaagctgcatatc
gtcttctacattgccctgttcgccctggtatcgaccctgctacccctggcgggttatacc
ggggtgggctttatggcggtgagttgcgtgaccagcttctggtggctactgatggcgcta
aaaggctatcgcagcgatgtgaacctgctgcgttggtcacgccaggtgttcggtttctcg
atactgaccatagccatcctgagcctcaccatggcgctggactttcaggtggccggccag
gcgccgctgctggccatgttgggctag
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