Shewanella loihica: Shew_0371
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Entry
Shew_0371 CDS
T00489
Name
(GenBank) transcriptional regulator, AraC family
KO
K13652
AraC family transcriptional regulator
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slo03000
]
Shew_0371
Transcription factors [BR:
slo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Shew_0371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GyrI-like
HTH_18
HTH_AraC
Cass2
tRNA-synt_1f
VHP
Motif
Other DBs
NCBI-ProteinID:
ABO22243
UniProt:
A3Q9U5
LinkDB
All DBs
Position
complement(419234..420100)
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AA seq
288 aa
AA seq
DB search
MNRAAHQAYSQRIQTVCDYIAKHLEQPLTLEQLSQKAHFSKYHFHRQFQVYTGITLGKYI
SLLRLKRASYRLVFHPELKITDIALDAGFENGESFSRAFKQVFAQTPTQFRLTPKWEQWS
QQYAKVNYTRRETVQIKLTQRDDIKVAVLEHQGSPAALNDSIQQFINWRKQSGESPVASS
LTLGVPFNDPNTVAPEAFRFDICGSVTAEVKANDFGVITKTIPGGRCAVIRHLGPHDQMD
DKIYQFYRDWLPQSGEELRDFPLYFEYHNFFPEVAEHELVTKIYFSLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagcagcgcaccaggcctatagtcaacgaatccagacggtttgtgactatatc
gcgaaacatctggagcagcccctgacgctggaacaactgagccagaaggcgcacttctcc
aagtatcattttcatcgccagtttcaggtgtataccggtataaccttaggtaaatacatc
agcctgctcaggctgaagcgggcctcataccgattggtgtttcatcccgaactcaagatc
accgacatcgccctcgatgccgggtttgagaacggcgaatccttctcgcgagcctttaag
caggtatttgcccagaccccgacccagttcaggttaacgcctaagtgggagcaatggagt
caacaatatgccaaggtgaactatacaaggagagaaactgtgcagatcaaactcacgcaa
agagacgatatcaaggtcgccgtgctggaacaccaaggcagcccggccgcactgaacgac
tcgattcaacaatttatcaactggcgtaagcagagcggcgaatcccctgtggccagcagc
ctgaccctgggcgtaccctttaacgaccctaacacggtagcgcccgaggcatttcgtttc
gacatctgtggctcggtaacggccgaggtcaaggccaacgactttggagtgatcaccaag
acgatccccggcggtcgctgcgccgtgatccgccatcttggaccgcacgatcagatggac
gataagatctatcagttctaccgcgactggctgccccagagcggcgaggagctgagggac
tttcctctctacttcgagtaccacaacttcttccccgaagtggcggagcatgagctggta
acaaagatctatttttcactgaaatag
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