Shewanella loihica: Shew_0378
Help
Entry
Shew_0378 CDS
T00489
Name
(GenBank) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
slo
Shewanella loihica
Pathway
slo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shew_0378
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slo01007
]
Shew_0378
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slo03016
]
Shew_0378
03029 Mitochondrial biogenesis [BR:
slo03029
]
Shew_0378
Enzymes [BR:
slo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
Shew_0378
Amino acid related enzymes [BR:
slo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Shew_0378
Transfer RNA biogenesis [BR:
slo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Shew_0378
Prokaryotic type
Other AARSs
Shew_0378
Mitochondrial biogenesis [BR:
slo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Shew_0378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ABO22250
UniProt:
A3Q9V2
LinkDB
All DBs
Position
complement(426010..427755)
Genome browser
AA seq
581 aa
AA seq
DB search
MKSHIQSLLEQAIQTLKQQAIIPADFEARIQVDRTKDKTHGDFATNLAMMLTKVARKNPR
EVAQLIIDSLPQNSQVAKVEIAGPGFINFFIDENALTNQLMAALSDDHLGVTLPTPQTVV
VDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEEL
RAQQGEQAQVELADLESFYRAAKVRFDESEEFATRARQLVVELQSGDEYCNKLWREFNDI
SLSHCHEVYERLGVSLTRADVRGESAYNDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQT
KEGEPLPVIIQKADGGFLYATSDLAAMRYRSNVLKADRALYFVDLRQALHFQQVFSLART
ANFVRPELSLEHMGFGTMNGEDGRPFKTRSGGVVKLVDLLSEAETRALELVRSKNPDMDE
EELAKIAKVVGIASVKYADLSKNRASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA
AEIDLTGASIKLEHDKEKELGNKLAQFAEVLGRMVAKGQPHALCGYLFELAGAFSSFYEA
CPVLAADSEDEKKSRLLLAQLTAKTLKQGLDLLGIETLERM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacatattcaatctttgctcgaacaagccattcaaaccctaaaacagcaggcg
atcatccctgccgattttgaggctcgtattcaggttgaccgaaccaaagacaaaacccac
ggtgattttgccaccaacctagccatgatgctgaccaaggtggctcgcaagaatcctcgt
gaggtcgcacagctgataatcgatagcctgccacaaaacagccaggtggctaaagttgag
atcgccggcccaggtttcatcaacttctttatcgatgagaacgccctgaccaaccagctg
atggccgccctgagcgacgatcacctgggtgtaaccctgccaacgccgcagacagtggtg
gtcgactactcttcgccaaacctggccaaagagatgcacgtaggccacctacgttcaacc
attatcggtgacgccgtggtacgcgcgctggagttccagggtcacaaggtgatccgccag
aaccacgtcggcgactggggcacccagttcggcatgctgctggcctacatggaagagcta
cgcgcccagcaaggcgagcaagcccaggttgaactggcggatctcgagagcttctaccgc
gccgcaaaggtacgtttcgacgagtcggaagagtttgctacccgcgctcgccagctcgtg
gttgagctgcaatcgggcgacgagtactgcaacaagctatggcgtgaatttaacgatatc
tcactgagccattgccacgaggtttatgagcgtctgggcgtgagcctgacccgcgccgac
gtgcgcggcgagagcgcctacaacgatgacctcgagcaggtggtacgggatctggatgcc
cagggcctattgtcagaaagtaacggcgccaaggtggtcttccaggatgagttccaaacc
aaagagggtgaaccactgcctgtgatcatccagaaggccgacggcggcttcctgtatgcc
accagcgatctggcggcgatgcgctatcgctcaaacgtactcaaggccgaccgcgccctg
tacttcgtcgacctgcgtcaggccctgcacttccagcaggtattcagcctggcccgcacc
gctaacttcgtccgtccagagctgagtctggaacacatgggctttggcaccatgaacggc
gaagatggtcgcccattcaagacccgctctggtggcgtggtgaagctggttgatctgctg
agcgaggccgagacccgtgcgctggaactggtacgcagcaagaatccagatatggatgaa
gaggagctggccaagatcgccaaagtggtgggtatcgcctcggtgaaatatgccgacctg
tcgaagaaccgcgccagtgactacatcttcagcttcgagcagatgctgagcttcgagggc
aacacggcgccttacctgctctacgcctacacgcgtgttgcaggcatcttcaagcgtgcg
gccgaaatcgacctcacgggcgccagcatcaagctggagcacgacaaagagaaagagctg
ggcaacaagctggcccagtttgccgaggtgctaggccgcatggtggccaagggtcagcct
cacgccctgtgtggctacctgtttgaactggctggcgccttctcaagcttctacgaggcc
tgcccagtgctggcggccgactcagaagatgagaagaagagccgtctattgctagcacag
ctgaccgctaagacgctgaagcagggtcttgatctactgggtatcgaaaccttagaacgc
atgtag
DBGET
integrated database retrieval system
