KEGG   Shewanella loihica: Shew_0392
Entry
Shew_0392         CDS       T00489                                 
Name
(GenBank) type II secretion system protein E
  KO
K12276  MSHA biogenesis protein MshE
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slo02044]
    Shew_0392
Secretion system [BR:slo02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   Shew_0392
SSDB
Motif
Pfam: T2SSE MshEN AAA_22 AAA_16 ResIII AAA_30 nSTAND3 AAA_29 Rad17 AAA_19 AAA_11 AAA_18 AAA_7 ATPase_2 cobW Zeta_toxin ABC_tran AAA_23 NTPase_1 AAA AAA_14
Other DBs
NCBI-ProteinID: ABO22264
UniProt: A3Q9W6
LinkDB
Position
442454..444214
AA seq 586 aa
MKPKLKMRLGDLLVQEAIISEAQLGQALAEQRNTGKKLGRTLIDLSCITEEQLLKFLSQQ
LNIPFLDISRRAIPPQVVNLLPEVQARRYRALAVEDNGDHVLVAMSDPADLQAMDNIEVL
LAPKAIKIAVVTETQLLEAFDNLYRRTGEIAQIAGKLEEEYAADDQFDLASLTDADSDNE
TTVVKLLQSIFEDAVQMRASDIHIEPGDKVLRIRQRIDGQLQENTLQEVNIASALVLRLK
LMAGLDISEKRLPQDGRFHMEIKGHKIDVRMSTMPIYHGESVVMRLLDQSAGLLTLDETG
MPAEMLARVRRQIKRPHGMLLVTGPTGSGKTTTLYGVLSELNTADRKIITVEDPVEYQLP
RINQVQVNHKIGLDFSNVLRTTLRQDPDIIMVGEMRDQETVEIGLRGALTGHFVLSTLHT
NDAVTSALRLLDMGAASYLVASALRVIIAQRLVRRVCHKCAQPYDASAADHAWLSSISGR
DFSQAKFRIGTGCQSCNGSGYRGRIGVFEILELDEKMIDAMRSGNPQAFAQAAYQSPNFT
PLAESALNYLAEGMTTMEEVAKLIEDASDAQVPISQEMIHQHEIEG
NT seq 1761 nt   +upstreamnt  +downstreamnt
gtgaaacccaagttaaagatgcgcctcggcgacttattggtacaggaagcgatcatcagc
gaggcgcagctgggccaggccctggccgagcagagaaataccggcaagaagctgggtcgc
accctgatcgatctctcctgcatcacagaagagcagctgcttaagtttctgtcgcagcag
cttaatattccctttttggatatcagccgccgggcgattccgcctcaagtcgtgaatctt
ctacccgaggtgcaggcccgtcgttatcgcgccctggcggtggaagataatggcgaccat
gtgctggtggccatgagcgaccctgccgatctgcaggcgatggacaatatcgaggtcttg
ctggcgcccaaggcgattaagatcgccgtggttaccgagacccagctgctggaggccttc
gacaacctgtatcgccgcaccggggagatcgcccagatcgccggtaagctggaggaggaa
tatgccgccgacgatcagttcgatctcgccagcctgaccgatgccgacagcgacaacgag
accactgtggttaagctactgcagtcgatcttcgaagacgcggtgcagatgcgcgcctca
gatattcatatcgagcccggtgacaaggtgctgaggatccgccagcgtatcgatggtcag
ctgcaagagaataccctgcaggaggtgaatatcgcctcggcactggtgctgcgcctcaag
ttgatggcgggcttggatatctcagagaagcgtctgccccaggatggtcgtttccacatg
gagatcaagggacacaagatagacgtgcgtatgtcgaccatgcctatctatcacggcgag
tcagtggtgatgcgtctgctggaccagtctgcgggcttgctgactttagatgagaccggc
atgccggccgagatgctggcgcgggtgcgcagacagatcaaacgcccccacggcatgctg
ctggtaaccgggcctacgggtagcggtaagaccacgacgctttatggcgtgttgagtgag
ctcaacaccgccgatcgcaagatcatcacggtagaagatccggtggagtatcagctgccg
cgtatcaatcaggtacaagttaaccataagataggcttagatttttccaacgtactgcgt
accaccttgcgtcaggaccccgatatcatcatggtgggtgagatgcgtgaccaggaaacg
gtggaaattggcctcaggggcgcgctgacaggtcactttgtgctgtcgaccctgcatacc
aatgatgcggtcacctctgccctgcgtctgctggacatgggcgccgccagctatctggtg
gccagtgcgcttagggtgatcatcgctcagcgtctggtgcgccgggtctgtcacaagtgt
gcccagccctatgatgctagcgccgccgatcatgcctggcttagcagcataagtggtcgc
gacttcagccaggccaagtttcgtattggcaccggctgtcagagctgtaacggtagcggc
tatcgtggccgtatcggtgtgttcgagatcctggagctggatgagaagatgatcgatgcg
atgcgtagcggcaatccccaggcgtttgcccaggccgcctaccagagcccgaactttact
ccgctggccgagtcggcgctcaactaccttgctgagggcatgaccactatggaagaggtg
gccaagcttatcgaagatgccagcgatgcccaggtacccatctcgcaggagatgatccat
caacatgagattgagggctaa

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