Shewanella loihica: Shew_0510
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Entry
Shew_0510 CDS
T00489
Name
(GenBank) putative outer membrane adhesin like proteiin
Organism
slo
Shewanella loihica
Pathway
slo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew_0510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
Big_13
CHB_HEX_C
Ig_J
Motif
Other DBs
NCBI-ProteinID:
ABO22382
UniProt:
A3QA84
LinkDB
All DBs
Position
complement(568682..577120)
Genome browser
AA seq
2812 aa
AA seq
DB search
MSQDKRPNTPPQDESSQARNQAKPQTNSQPASEPEPLTEAQRREREAERLARAQDKAVQK
LKAEEYRDGKTTSRFNQDLVADKPWHAAASASAEPQIEHADLANSADQGPMAQGDQTPSS
TELDDRIASAAQSQQSQSHQSQSQEVQSQEAQTQETQTPEAQANAAQVQNKLAHRAAQTT
GIEEFSGFEKGTAQAPNLTPLAHALTSGGTPPAFQVTLTSSETQAHKPPQPSTGSTQQPS
TQQTGTQPPTTERPTTDPQVSLTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTHENPLHIDS
QQDFQTIKENSVIDTVSDKLAASGDTKDTVTWSVETSKGQYGDLVLNPSTGEWHYHLNNF
DAKTNALFEGEHHNETFTITATDNLGNRVSSVICVAVEGSNDLPVISGVHHASLNELGSV
DKVSGQLIATDPDTGDGVHWAVPHSSGVYGELVIDPDTGVWQYRIDNSSPNTLALHAGQV
ATETFRVTATDSSGQPVSQIVTIEVHGADQRAIIHGIASGSVTEDRDLVAGQLQTSGQLT
VIDPDGGDAHFIATTLQGQYGTLTINDLGHWTYTADNSQSAIQGLKSGESLTETLFVHSI
DGSDQKVTVTINGTDDRAVIGATTGAVTEDKDLYQGLLRVDGALTVTDADHGEEQFVATS
LQGQYGTLTINNLGHWTYTADNSQAAIQGLKSGESLTETLFVHSVDGTEQKVIVTINGTD
DRAVIGGTATGTVTEDKDLYQGQLRVDGALTVTDADHGEAQFVATSLQGQYGTLTINDLG
HWTYIADNSQAPIQGLKSGESLTETLFVHSIDGTEQKVTVTINGTDDKAVIGGASTGAVT
EDKDLYQGQLRVDGALSVTDADHGESQFVATSLQGQYGTLTINELGHWTYTADNSHSAIQ
GLKSGESLTETLFVHSIDGTEQKVTVTINGTDDKAVIGDASTGAVTEDKDLYQGQLRVDG
ALTVTDADHGEAQFVATSLQGQYGTLTINDLGHWSYTADNSQTAIQGLKSGESLTETLFV
HSIDGSEQKVTVTINGTDDKAVIGGTATGIVNEDRDLYQGQLRVDGALTVTDADSGQNQF
IATSLQGQYGTLTINDLGHWTYTANNSQAAIQGLKAGESLTETLFVHSVDGTEQQVTVTI
NGTDDKAVIGGAATASVTEDRDLYQGQLRVDGALTVIDADSGQAQFQATSLQGQFGTLSI
DSNGHWTYTADNDQPAIQGLKSGESLTETLFVRSVDGTEQRVTVTINGTDDKAVIGGPST
GAVTEDRDLDQGQLRVDGALRVTDPDSGQAQFQATSLQGQFGALSIDSNGHWTYTADNSQ
ATIQGLKSGESLTETLFVHSVDGSKQKVTVTINGTDDRAVIGGAATGAVTEDRDLYQGQL
RVDGALSVTDADHGEAQFIATSLQGQYGTLTINDLGHWTYTADNAQPAIQGLKSGKYLSE
TLMVHSVDGTEQPITIKISGQDDAAVITGEDKGNLKEDYYPAGDAHNTLHYTGSLDVHDP
DKGESYFRATHDAQAISDPFGGSLDIEKHGVWQYVVSNNALQHLGKGQFEQVVYRVYSAD
GTSKDITITLEGTNDAPVISATQILPAGQEDTQMRLTPAQLLAHAKDVDDNDAGQLTVAN
LQADHGTITTNPDGSFSFTPEKDYNGAVHFTYDVKDAHGGVTHTGASTTLAAVSDQAQVS
GDTRGELVEDQHPDAHNQIAISGQLNVQDPDAGQAAFQAGTATQVDDPFGGSLHIGADGS
WTYDVDNARLQQLSEHQEVLVTHRVYTLDGTAQDIVIKITGTNDAPKLGVVRLSSTTGHL
TVQDPDNQDSHSFSVAQQTGQFGTLVVDPDTGAYSYHLNQSVAGMHYDKASGQYQGTDTF
EVQVSDNHGGSETKFISFDARVSLTMPTGTGLQPQLHATVTSPSQLVDTKPQQTPTQTIG
NAITLVLSHGSDTGVSDSDGITHDSHPVVEGQTDIPFSLVTLYEQGNKLTSLLSDAQGHY
SVALSGLSEGAHQISASAQAPGSQQTVQATPLALTLDTQTDIAVHSASLNGHGELVVQVY
LPKDSELTQLVISSSGGGQPLVIDPQHHDAIGGSVSHPDHQYINFEHIDLSSLPDGELTI
SVRGQDVAGNQASASSSQFNGLPLSLNTNIPPLTLALTHDTGQSSSDGITTDASLTIGGQ
LAGMRVEYSVDGGQHWQSQFTPVQGHNQLWVRQTDAFGHASPHTQLDFELDNQAPLPQIR
LDAITPDNLVNAVEAGRSIAVTGSVNSEVPGGTPITLAIGQQTYQGQVDNQGHFSVQVPG
SELAGAHEINASLTTTDLAGNQGSATENHQYQVDTQASIDMNPIAGDNMLQAGEQHQALT
ISGTVTNVEEGQRVTVSIGGQQYHANVHNGCWSTQLSAAEVDALPGGSLEIKAMVSDLAG
NQAQMSSPLYVVDHANPIPSMSFITPPTPTGTGAIGSHISGDLIAPPLLQQLTPNAPTTG
AWAIDDGHGHPTLSLRGQYGTLTIDPDTGHVDYVYNQAPTPGDKAAGGTHWAGETTSETH
HDIFHILYHDSHSSNVDVEVNLDITYVHGHSGHNQLSTQLVDMTVTPVTTSPAPPPPPPE
LHDTPQWDDNQDASDDAQVIVIQASEGEAEDKHAADLDEKLVHSQPHELAASGAEPSHTE
ADTRPLAAATLAPVDHYLQMVGLSQQDLAQVESHTKPQPDLETPLMATEHFDADDLTLTP
ADQFDNPLLEEHEKEKPHPSLVDIDDPRDDQHASAHDDDLLHNALNDMHNQF
NT seq
8439 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagataagcgccccaacacgccgcctcaggacgaatctagtcaggctaggaat
caggcgaagccgcaaaccaattcgcagccggcgagcgagccggagccgttaacagaggct
cagcgacgtgagcgcgaggcggaacgtctcgccagggcgcaggataaggcggtccaaaag
ctcaaggccgaagagtatcgcgatggcaagacgacgagccgcttcaatcaagatctggtg
gcggataagccttggcacgcggccgccagcgcaagcgcagagccacaaatagagcacgca
gatctggcaaatagtgcagatcagggcccaatggctcagggagatcagacaccaagttca
acagaattagacgataggatagcgtcagcggctcagtcacagcaaagccagtctcatcaa
agtcagtcccaagaggttcagtcacaagaagcccagacacaggaaactcaaacgccagaa
gcacaagcaaatgcggcgcaggtgcaaaacaagttggcccaccgcgcagcgcagaccacg
ggtatagaggagtttagcggcttcgaaaaaggcacagcccaggccccaaacctgacgcct
cttgctcacgccctcacctcaggcggcacgccacccgcctttcaggtgaccctgacgagc
agcgagacacaagctcataagccaccacagccgagcacaggctcgacacagcagccaagc
acacagcaaacaggcactcagcccccaacaactgagcgccccactaccgacccacaggtc
tcgcttactggcactggcactggcactggcactggcactggcactggcactggcactggc
actggcactggcactggcactggcactggcactggcactggcactggcactggcactggc
actggcactggcactggcactggcactggcactggcactggcactggcactggcactggc
actggcactggcactggcactggcactggcactggcactggcactggcactggcactggc
actggcactggcactggcactggcactggcacgcatgaaaatccgttacatattgatagt
caacaagattttcaaacgattaaagaaaatagtgttatcgatacggtatcggacaaactc
gcggccagcggcgacactaaggataccgtcacctggtcggtagagaccagcaaggggcaa
tatggcgatcttgtactgaatcccagcacaggtgagtggcactatcatctcaacaacttc
gatgccaagaccaatgccctgttcgaaggcgagcaccacaatgaaacctttaccattacg
gccacagacaatttgggcaacagagtcagcagcgtcatatgcgtcgccgtcgagggcagt
aacgatctgccggtgatctccggcgtccatcatgctagcctcaacgagctgggctcggtt
gataaggtgtcggggcaattgatcgccacggatcctgacacgggagacggcgtccattgg
gctgtgccccattcatcaggcgtctatggcgagctagtgatcgacccagatacaggtgtc
tggcagtatcggatcgataatagctcgcccaacaccctggccctacatgcaggccaggtg
gccacggaaaccttcagagtcacggcaaccgacagctcgggacaacccgtcagccagata
gtgacaatagaagttcacggcgcagatcagcgagccatcatccatggcattgccagcggc
tcggtgacagaagacagagacctggtcgccgggcagctacagacatcggggcaactgacg
gtgatcgatcccgatggcggcgatgctcacttcattgccaccacactccaagggcaatac
ggcactctgactattaacgatctcggccactggacctacaccgccgacaactctcagtcc
gcgatacaagggctcaagtctggcgagtccctcaccgagaccttgtttgttcactcaatt
gatggcagcgatcagaaggtcacggtcaccatcaatggtacagacgacagggcggtgatt
ggcgccaccacgggagccgtgaccgaagacaaagacctctatcagggcctactgagagtc
gatggcgcgctgacggtgaccgatgccgatcatggcgaggagcagtttgtcgccaccagt
ctccaaggccaatacggcactctgacaatcaataacttaggccactggacctacacagca
gataactcacaggccgcgattcaaggactcaagtccggcgagtcactcaccgagaccctg
tttgttcactcggtcgacggtacagagcagaaggtgatcgtcaccatcaatggcacagac
gacagggctgtgattggcggcacggccacgggcacagtgaccgaagacaaagacctgtat
cagggacaactccgcgtcgatggcgcgctgacggtcacagatgccgaccacggcgaggcg
caatttgtcgccactagcctccaaggtcagtacggcactctgactattaacgatctcggc
cactggacctacattgcggacaactcacaggccccgatacaggggctcaaatccggtgaa
tcccttaccgagactctgtttgttcacagcatcgatggcaccgaacagaaggtcaccgtg
accatcaatggcacggacgataaggcggtcattggtggcgcttcaacaggggcggttact
gaagacaaagatctctatcagggtcagctcagggtggacggtgccctgagcgtaaccgat
gccgatcatggcgagtcgcaatttgtcgccactagtttgcaaggccaatacggtaccctg
accatcaacgaactcggccactggacctacactgcggacaactcacatagtgcgatacaa
gggctcaagtctggtgagtcactcacagagactctgtttgttcacagcattgatggcaca
gagcagaaggtcacggtcaccatcaatggcacggacgataaggctgtgattggcgacgct
tcaaccggggcggttaccgaagacaaagatctctatcagggacagctgagggtggacggt
gcgctcacggtcacagatgccgaccacggcgaggcgcaatttgtcgccaccagcctgcag
ggacaatacggcaccctcaccatcaacgatctcggccactggagctacacggcggacaac
tctcaaaccgccattcaggggctgaaatccggcgagtccctcaccgagaccctgtttgtt
cactcaattgatggcagtgagcagaaagtcacggtaaccatcaatggcacagacgacaaa
gctgtgattggcggtactgcaacggggattgttaatgaggacagagacctctaccaaggc
caactaagggtcgatggcgcgctaacggtcaccgatgccgatagcggccaaaaccagttc
atcgccaccagcctacagggccaatacggcaccctgaccatcaacgacctcggtcattgg
acttacaccgccaataactcccaggctgcgatacaagggctcaaggccggcgagtcactc
acagagaccctgtttgttcacagtgtcgatggcacagagcagcaggtgaccgtcaccatc
aatggcacagacgacaaggcggtgattggcggcgcggcaacagccagcgtgaccgaagac
agagacctctaccagggacagctgagggtggacggcgcgctgacggtgatcgatgccgac
agtggtcaagcgcagttccaggcaacctcactacaaggtcaattcggcacactgtcgatt
gattcaaatggccattggacctacacggccgacaatgaccagcctgccattcaggggctc
aagtccggcgagtcactcaccgagactctgtttgtacgctcggtcgatggcacagagcag
agagtcacggtaaccattaatggcacggacgataaagctgtgattggcggcccttcaacc
ggggcggttactgaagatagagacctcgatcagggacaactgagagtggacggtgcgctc
agggtcaccgatccagacagtggtcaagcgcagttccaggctacctcactacaaggtcaa
ttcggcgcactatcgattgattcaaatggccactggacctacaccgccgacaactcccag
gccacgatacaggggctcaaatccggcgagtcgctgactgaaaccctgtttgttcacagc
gttgacggcagcaagcagaaagtcacggttaccatcaatggcacggacgacagggctgtg
attggcggtgctgcaacgggggcggttaccgaagacagagatctctatcagggtcagctc
agggtggacggtgccctgagcgtaaccgatgccgatcatggcgaagcgcagttcatcgcc
accagcctgcagggccaatatggcaccctcaccatcaacgatctcggccactggacctac
actgcggataacgcccagcccgcgatacaaggtctcaaatctggcaagtacctcagcgaa
accctgatggtgcatagcgtcgatggcacagagcagccgatcactatcaagatctcagga
caagacgatgccgccgtcatcacgggagaagacaagggcaaccttaaggaagattattat
cctgccggcgatgcgcacaataccctgcactacactgggtccctggacgttcatgatcca
gataagggggagagctattttagagcgactcacgacgctcaggcaatctcggatcccttc
ggtggcagcctggatatcgagaagcatggagtgtggcagtacgtagtctcaaataacgcc
ctccaacacttgggtaagggacagtttgagcaggtcgtctatcgcgtctacagcgccgat
ggcacaagtaaagatatcacgatcaccctagagggcaccaacgatgcccccgtgattagt
gctacccagatactccctgctggtcaggaagatactcagatgcggcttaccccggcgcag
ctgctagcccacgccaaggatgtcgacgacaacgacgccggccaactcacggtcgccaat
ctccaggccgatcatggcactatcaccaccaaccccgacggcagcttcagcttcacgcca
gagaaggactacaacggcgcggtacactttacctacgatgtcaaagatgctcacggcggc
gtgactcacacaggcgccagtaccacactggcggcggtgagtgaccaggcccaggtctcg
ggggatacccggggcgagcttgtcgaagatcaacacccggacgcccacaaccagatagcc
atctcgggccagctcaatgtgcaggatcccgacgcgggtcaggcggccttccaagcgggc
acggcgacacaagtggacgatcccttcggcggtagcctacatattggcgccgacggcagc
tggacctacgacgtcgacaacgccaggctacaacagctgagcgaacatcaggaggtcttg
gttacccacagagtctataccttagacggcacggcgcaggatatcgtcatcaagataacc
ggcaccaacgatgctcccaagctaggtgtggtgcggctctccagcaccacggggcatctc
acggtacaagaccccgacaaccaagacagccacagcttctcggttgcccagcaaactgga
caatttggcaccctggttgtcgacccagacacaggcgcctacagctaccacctcaaccag
agcgtcgccggcatgcattatgacaaggccagcggtcagtaccaaggcacagacaccttc
gaggtgcaggtcagtgacaaccatggcggcagcgagaccaaatttatcagcttcgatgca
agggttagcctcaccatgccaaccggcacaggcctgcaaccccaattgcatgccacagtc
accagcccatcacagctggtggacactaaaccccagcagacaccaacacagaccataggc
aacgccatcaccctagtactgagtcatggcagcgataccggagtctccgacagcgacgga
atcacccatgactcccaccctgtggtcgaggggcagacggacatccccttctccctggtc
accctatatgagcagggcaacaagctcaccagcctgttaagtgatgctcaggggcactac
agcgtcgcactcagcggccttagcgagggcgcccatcagatcagcgccagtgcccaggcc
cccggcagtcaacaaactgtgcaggccacaccgctggcgctcacactcgacacccagaca
gatatagccgtgcatagcgcctctctgaatggtcatggcgagttggtggtgcaggtctac
ctgcccaaggatagcgagctgactcagctggtgatcagcagcagtggcggcggtcagccc
ctggtgatcgaccctcaacaccacgacgccattggtggcagcgtgagtcatcccgatcat
cagtatattaatttcgagcatatcgacctctcatcgctgcccgatggcgaactcaccatc
agcgtgcgcgggcaagacgtagcgggcaatcaagcctcggccagcagcagccaatttaac
ggcttaccgctcagcctcaacaccaatataccgcccctcaccttggcgctgacccatgat
accggccagtccagcagtgatggcatcaccacagacgccagcctgaccataggcggccag
ctcgccggcatgcgggtggaatattcagtcgacggcggtcagcattggcagtcgcaattc
accccggtgcagggccacaaccagctttgggtgcgccagaccgacgccttcggccacgca
tcgccccacacccaactcgactttgagctggataatcaggcgccgctcccccagatacga
ctcgacgccatcacaccagacaatctggtcaatgccgtcgaggcgggcagaagcatagca
gttacgggcagcgtcaacagcgaagtgcccggaggtacgccaatcaccctggccataggg
caacagacctatcagggacaggtggacaaccaagggcatttcagcgtgcaggtgcccggt
agcgagctggccggcgcccatgagataaatgcctccctgaccaccacagatcttgccggt
aaccagggaagcgctacggagaaccatcaatatcaggtcgatacccaggccagcatagac
atgaaccccatcgccggcgacaacatgctacaggccggagagcagcatcaagccctcacc
atcagcggcacggtcactaatgtcgaagaggggcagagggtgaccgtctccataggtggg
cagcaataccatgccaacgtgcataacggttgctggagcactcagctgagcgccgccgag
gtcgatgccttgccgggcggcagcctggagatcaaggccatggtcagcgatctggccggt
aaccaggcacagatgagcagccccctgtatgtggtcgaccacgccaacccaatccccagc
atgagttttatcacgccgcctacgccgacggggactggcgccataggctcccacatctcg
ggcgatctcattgcgccgccgctactgcaacagcttacccccaacgcccccaccactggc
gcctgggcgatcgatgacggtcatggtcaccccaccctgagcctcaggggtcagtacggc
acactcaccatagatccagataccggccatgtggattatgtctataaccaggcaccgaca
cctggcgacaaggctgccggcggcacccactgggcgggggaaaccacctcggaaacccat
cacgatatctttcatatcctctatcacgacagccactcctccaatgtggatgtggaagtg
aatctagatatcacctatgttcacggtcacagtggtcacaaccaactatcgacccagttg
gtagatatgacggtcacccctgtcaccactagccctgccccgccgccaccgccgcctgag
ctgcacgatactccccaatgggatgacaaccaggacgccagtgatgacgcccaggtcatc
gtcatccaggcaagcgaaggcgaggcagaggataagcatgctgcagatctggatgagaag
cttgttcatagccagccccatgagttggcggcgagtggcgccgaaccctctcatacagag
gcggacacccgcccactggcggctgcgacgctcgcccctgtggaccactatctgcagatg
gtggggctgagtcagcaggatctggcgcaagtcgagagtcacactaagcctcagcctgat
ctggagacgcccctgatggccacggagcacttcgacgccgacgatctcaccctaaccccg
gcagatcagttcgacaacccgctgctggaggagcatgagaaagagaagcctcatccatcg
cttgtggatatcgacgatcccagagacgatcagcatgccagtgcccatgacgacgacctg
ctgcacaacgccttaaacgatatgcacaaccagttttaa
DBGET
integrated database retrieval system
