KEGG   Shewanella loihica: Shew_0535
Entry
Shew_0535         CDS       T00489                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
slo  Shewanella loihica
Pathway
slo03030  DNA replication
slo03430  Mismatch repair
slo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Shew_0535
   03430 Mismatch repair
    Shew_0535
   03440 Homologous recombination
    Shew_0535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slo03032]
    Shew_0535
   03400 DNA repair and recombination proteins [BR:slo03400]
    Shew_0535
   03029 Mitochondrial biogenesis [BR:slo03029]
    Shew_0535
DNA replication proteins [BR:slo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Shew_0535
DNA repair and recombination proteins [BR:slo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Shew_0535
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Shew_0535
Mitochondrial biogenesis [BR:slo03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Shew_0535
SSDB
Motif
Pfam: SSB SSB_1 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABO22407
UniProt: A3QAA9
LinkDB
Position
608229..608891
AA seq 220 aa
MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQMQERTEWHNIVMY
RRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQQTGQDRYKTEINVNEMQMLDSRGQGQGGQ
GGQQGYGAPQQQNQYAPQQSAPAARPQQPQHSAPQGGYGAQQQAAPQQQGYGAQPQQAPA
YAPKPQAAPQQQAPQQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq 663 nt   +upstreamnt  +downstreamnt
atggccagtcgtggtgtcaataaggtaattttggtcggtaacctagggaaagatcccgaa
gttcgttacatgccaaacggcaacgccgtagccaactttacagtggcgaccagtgagtct
tggaaagaccagcaaggtcagatgcaagaacgtacagaatggcacaacattgtaatgtac
cgtcgtcttgcggagatcgccggtgagtacctgaagaagggctcgaaagtgtatctggaa
ggtaaactgcagaccagcaagtggcaggatcagcagaccggacaagatcgctacaagaca
gagatcaacgttaacgagatgcagatgctggatagccgtggccaaggccaaggcggtcag
ggtggccaacaaggttacggtgcgccgcaacagcaaaaccaatacgcaccacagcagtcg
gcgccagccgcgcgtccacagcagccgcaacactcggctcctcaaggtgggtacggtgcc
cagcaacaggcagcaccacagcagcaaggttatggcgctcaaccacagcaggcccctgcc
tatgcacctaagccgcaggcggctccacaacagcaagcgccgcagcagcgtccagcacct
cagccacagcagaacttcacgccggatctggatgacggttgggacgacgatatcccgttc
tag

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