Shewanella loihica: Shew_0719
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Entry
Shew_0719 CDS
T00489
Name
(GenBank) periplasmic binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
slo
Shewanella loihica
Pathway
slo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew_0719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0719
Transporters [BR:
slo02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
Shew_0719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
ABO22591
UniProt:
A3QAU3
LinkDB
All DBs
Position
819519..820343
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AA seq
274 aa
AA seq
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MKMRVKLWLLLALLLCVPGLKAAPAKRIIALSPHGVEMLFSIGAGDSVVATTDHADFPDA
AKAIPRIGGYYGIQIEKVIELDPDLIVIWGGGNKREDIERLTQLGYPIYNSDPKTLEAVA
DDLLALGKLTGKEREAERVAEQYLIGLKALSKENRAKAAVRVFYQLWSVPLMTVAEGSWI
EQIIQVCHGENVFSDAGNEYPQVSLEAVLLKQPQVILQSQDEGNVRGIDWSAWQEIPAVK
QRHIYQLDADLLHRATPRAILGIESLCKALDKAR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgagggttaagctgtggctgttgttggccttgctgctgtgtgtgcctgggctt
aaggcggcgcctgcaaaacggatcatcgccctgtcgccccatggggtggagatgctgttt
agtataggggcgggggacagtgtagtcgcgaccacagatcatgccgattttcccgatgcg
gccaaggcgatcccgcggatcggcggctactacggcatacagatagagaaagttatcgag
ctcgacccggatctgattgtcatctggggcggcggcaacaagcgcgaggatatcgagcgc
ctgacccagctgggttatcccatctataacagcgaccctaagacgttggaggcggtggct
gacgatctgctggcgctgggcaagctgaccggcaaggagcgcgaagcggagcgggtggcc
gagcagtaccttatcggcctcaaggcgctcagtaaggaaaatcgggccaaggcggcggtg
cgggtcttctatcagctctggtcagtgcctctgatgacggtggccgagggcagctggata
gagcagattatccaggtctgccacggcgagaatgtgtttagcgacgcggggaacgagtat
ccccaggtgagcctggaggccgtgctgctcaagcaacctcaggtgatattgcagagtcag
gatgagggcaatgtgcgcggcattgactggtctgcctggcaggagatcccggcggtgaag
cagcgccacatctatcaactggatgccgacctattgcatcgagcgacaccaagggccatc
ttagggattgaatctttgtgcaaggccctggacaaggcgagataa
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