Shewanella loihica: Shew_0767
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Entry
Shew_0767 CDS
T00489
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slo03009
]
Shew_0767
Enzymes [BR:
slo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Shew_0767
Ribosome biogenesis [BR:
slo03009
]
Prokaryotic type
rRNA helicases
Shew_0767
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
AAA_11
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABO22639
UniProt:
A3QAZ1
LinkDB
All DBs
Position
complement(875149..876408)
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AA seq
419 aa
AA seq
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MYNAPLLFRETQRMQFEDFHLDDTLLESLKAMGHLAPTTIQQQTIPLALEHKDILARAPT
GTGKTASFLLPALQHLLDFPRRYSGQARVLILAPTRELASQVHRYASHLATGLGLDIAII
TGGVPYAPQEQALKENIDILVATPGRLMEYLDKELFDAQSVEILVLDEADRMLDMGFSSA
VQSIAIEAQQRKHNMLFSATLEGGGVSRFAEMLLTNPVTIETKPPRSEKAKIHQWMHLAD
DKEHKFALLCDILKREEVSRAIVFVKTREVVASLEGQLQQAGIHCAFMRGDMEQKARFQA
LGRFTKGEVNVLLATDVAARGIDIDGITHVINFDMPRSADTYVHRIGRTGRAGNKGTAIS
LVEAHDMRVVAKIERYIEQPLKRRVIDSLRPKHKEAKVPTKKKVKSSDKKSPKKAKKKR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgtataatgcgccgctattatttagagagacgcagcgcatgcaatttgaagatttccac
cttgacgacaccctgctcgagtcgctcaaggcgatgggccatcttgccccgaccaccatc
cagcaacagacgatccccctagccctggagcacaaagatatcctggcgagggcaccgaca
ggcacaggcaagaccgccagcttcctgctaccggcgctgcaacatctgctggacttcccc
cgccgctactcgggccaagcgcgcgtgctgatcctcgccccaacccgtgagctggccagc
caggtacacagatacgccagccacctggccaccggcctggggctggatatcgccatcatc
acgggcggtgtgccttacgctccgcaggagcaggcgctcaaggaaaatatcgacattctg
gtggccacccccggccgtctgatggaatacctggacaaggaactcttcgacgcccaatcg
gtggagatcttggtactcgacgaggccgatcgcatgctggacatgggtttctcctccgcg
gtgcagtctatcgccatcgaggcgcagcagcgtaagcacaacatgctgttctctgcgacc
ctggaaggcggcggtgtgagtcgattcgccgagatgctactgaccaatcccgtaaccatt
gagactaagccgccccgcagcgagaaggccaagatccatcaatggatgcacctggccgat
gacaaagagcataagtttgccctgctgtgcgacatcctcaagcgtgaagaggttagccgc
gccatcgtcttcgtcaagacccgcgaggtcgtagccagcctggaaggtcagctgcaacag
gcaggtatccactgcgccttcatgcgtggcgacatggaacagaaggcgcgctttcaggcg
ctgggtcgcttcaccaagggcgaggttaacgtgctgctggccaccgacgtggcggcccgc
ggtatcgacatcgacggcatcacccatgtgatcaacttcgatatgccgcgctcggcagac
acctatgtgcaccgcatcggccgtaccggccgcgccggtaacaagggcacggccatctcg
ctggtcgaggcccacgacatgcgtgtcgtcgccaaaattgagcgctatatcgagcagccg
ctgaaacgccgggtgatcgactcgctgcgtcctaaacacaaggaagctaaggtgcccacc
aagaagaaggtgaagagcagcgacaagaagagcccgaagaaagccaagaagaagcgctag
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