Shewanella loihica: Shew_0818
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Entry
Shew_0818 CDS
T00489
Name
(GenBank) peptidase U32
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slo01002
]
Shew_0818
Peptidases and inhibitors [BR:
slo01002
]
Peptidases of unknown catalytic type
Family U32
Shew_0818
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
ABO22690
UniProt:
A3QB42
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Position
941285..943198
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AA seq
637 aa
AA seq
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MDKPEIFIPDSAASAPVTTRSNRLELLAPAKNADYGIEAIKHGADAVYIGGPAFGARATA
GNSVEDIARLCEFAHRYHAQVFVAINTILMDDELDAAQKLIWQVYEAGADALIVQDMGVL
QLDIPPIALHASTQMDNRNPEKVAFLEQVGFSQVVLARELGLSQIRDVAAKTNMQLEFFI
HGALCVAYSGLCNLSHAFSNRSANRGECSQMCRLPGDLKTRQGEVLAQNEHLLSLKDNNQ
TDNLEALIDAGIRSFKIEGRLKDLSYVKNVTAHYRQELDKIIARRPEFVASSHGRCEHSF
TPNTEKTFNRGRTDYFVNERSQGVSDFRSPKYIGEEVGKVAALGKDFIQVESSHSFNNGD
GLCYFPPNYEKAKQSDDKLQGLRVNRADGNKLYVIAVPGDLKVGATLYRNHDQAFETVLS
KESSKRIIKVDMTLSDTEKGIALTMTDQYGLSATRELELDRTPATDTEKALKNLRKQLGK
LGSTDFEAREINIETASPWFMPASLLNGLRRDTVAALELARVEGYERPQAWKYNQDAVYP
FKHLSFMGNVANEKAKDFYTRHGVIEIEDTYEKNGVTEDAPLMVTKHCLRFNFNLCPKEV
PGIKAEPLQIEIGKDVLKLVFDCPKCEMMVVGANRQV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcctgagatttttatccccgatagcgccgccagtgcgccggtaactacccgc
tcaaaccgcctcgagctcttggcccccgccaagaatgccgactatggtatcgaggccatc
aagcatggtgccgacgccgtttatatcggtggcccagctttcggtgccagggcgactgcc
ggcaacagcgtcgaggatatcgcgcgtctgtgtgagtttgcccaccgctatcacgcccag
gtgtttgtcgccatcaacaccatcttgatggacgatgagctggacgcggcgcagaagttg
atctggcaggtgtatgaggccggtgccgacgcgctgatagtgcaggatatgggggtgctt
cagctggatattccaccaatcgccctgcatgccagtacccagatggataaccgtaatcca
gagaaggttgccttcttagagcaggtaggcttctcacaggtggtgctcgcccgtgaactg
ggcctgagtcagatccgcgacgtggcagctaagaccaatatgcagctggagttcttcatt
cacggcgccttgtgcgttgcctacagcggcctgtgtaacctgagtcatgccttcagtaac
cgcagcgccaaccgcggtgaatgctcgcagatgtgccgtctgccgggggatctcaagacc
cgccagggtgaggtgttggcgcagaacgaacatctgctgtcgctcaaagacaacaaccag
acagataacctggaggcgctgatcgacgccggtatccgctcctttaagatcgagggccgc
ctcaaagatctcagctatgtgaagaacgtgaccgctcattatcgccaggagctggataag
atcatcgcgcgtcgccccgagtttgtggcatcgagccacggccgctgcgagcacagcttc
acgcctaacactgagaagaccttcaaccgtggccgcaccgactacttcgtcaacgaacgt
agtcagggggtcagcgatttccgctcaccgaaatatatcggtgaagaggtgggcaaggtc
gccgccctgggtaaagattttattcaggtagaatcgagccacagcttcaacaacggtgac
ggcctatgttacttcccgcctaattatgagaaggccaagcagtctgacgataagctgcag
gggctcagggtcaaccgcgccgacggcaacaagctgtatgtgatcgccgtgccgggcgat
cttaaggtaggcgccaccctgtatcgtaaccatgaccaggcgttcgagacagtgctgtcc
aaggagtcctccaaacgcatcatcaaggtggacatgacgctgagtgataccgaaaaaggg
atcgccctgaccatgacggaccaatatggcctgagcgccacgcgcgagctggaactcgac
aggaccccggccacagacacagagaaggcgctgaagaatctgcgtaagcagctgggtaag
ctgggcagcacggacttcgaggcccgcgagatcaatatcgagactgccagtccctggttt
atgccggcctccctgcttaatggcctgcgccgtgacacggttgccgccctggagctggcg
cgcgtcgagggctacgagcgtcctcaggcatggaaatacaaccaagacgccgtctatccc
tttaagcatctgagcttcatgggtaacgtggccaacgagaaggcgaaagacttctacaca
cgtcatggggtgatcgagatagaagacacctatgagaagaacggcgtgaccgaggatgcg
ccgttgatggtgaccaagcactgcctgcggtttaactttaacctatgcccgaaagaggtg
cccggcatcaaggcggagccgctgcagattgagataggtaaagatgtgcttaagctggtc
ttcgactgtcctaaatgcgaaatgatggttgtcggcgctaaccgtcaggtatag
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