Shewanella loihica: Shew_0853
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Entry
Shew_0853 CDS
T00489
Name
(GenBank) ABC transporter-related protein
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
slo
Shewanella loihica
Pathway
slo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew_0853
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0853
Transporters [BR:
slo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Shew_0853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_15
Roc
DUF87
DUF815
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_30
ABC_ATPase
nSTAND3
AAA_10
MMR_HSR1
Selenoprotein_S
AAA_23
Ras
Motif
Other DBs
NCBI-ProteinID:
ABO22725
UniProt:
A3QB77
LinkDB
All DBs
Position
975818..977593
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AA seq
591 aa
AA seq
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MRPTLYFDGPIDKLNWHVLKLLWPYLLEFKGRVILALACLVVAKMASVGLPFVLKQLVDT
LSEASVEQMIAVPIALVLAYGSLRLLNTVISEVRDTLFGRVTERAIRRLGLSVFDHLHRL
DLAFHLERRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIGLVVGILLYNYGWAFALI
TLSAVVAYILFSIFATEWRTGFVREAAMADSQSNTRAIDSLLNYETVKYFNNEAYESEQY
DHALERWEVAKRKNRLSLFALNAGQALIISLAMTLMLALAATQVSQGAMTIGDFVLINAF
MMQLFMPLNFLGFVYREIRGALANIERMFSLLDRQPKIEDGPDATSPQIAQGSLKFEGVS
FRYGDRPILSDVSFEIPAGHKVAIVGDSGAGKSTIVKLLFRFYETQQGTITIDGHDTKAL
TQHALRSAIAIVPQDTVLFNDSLMENIRYGLPGASDEQVKAAIELAHLSNFVSQLSEGWH
TKVGERGLKLSGGEKQRVAIARAILKGSPLLVFDEATSSLDSHSEQAILNALKEMAKGHT
SLVIAHRLSTVVDADQILVLSQGKIVERGDHQSLLAADGLYKKLWTVQNQH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccacgctctattttgatggtcctatcgataaactgaactggcatgtcctgaaa
ttgctttggccctatttgttggagtttaaggggcgagtgatcttggcgcttgcttgtctg
gtggtggccaaaatggcgagtgttggcctgccattcgtgctcaagcaattggtggatacc
ctgagtgaggcctcagtcgagcagatgatcgccgtgcccatcgccctggtgctcgcgtac
ggcagccttcgcctgctcaatacggtgatctcagaggtgagagacacactatttggccgg
gtcaccgagcgggcgataaggcgtcttggcttgtcagtgtttgaccatctgcaccggctg
gatctggcatttcatcttgagcggcgtaccgggggactgtcgcgggatatcgagcgcggt
accagcggggtcagcttcttgatgcgcttcatggtattcaacatagtaccgaccctgctc
gagataggcctggtggtgggcatcttgctgtataactatggctgggcgtttgcgttaatt
actctgagcgcggtcgtcgcctacatcctcttctccatcttcgccaccgaatggcgtacc
ggcttcgtgcgggaggcggcgatggccgattctcagtccaatacccgcgccatagatagc
ctgcttaactatgagacggtgaagtactttaacaacgaggcctatgaatctgagcaatat
gatcatgccctcgagcgctgggaagtggccaagcgtaagaatcgactctcattgtttgcg
ctcaatgccggtcaggcgctgatcatctcgctggcgatgaccctgatgttggcgctggcg
gcgactcaggtgagccaaggggctatgaccataggtgactttgtgctgatcaacgccttc
atgatgcagctgtttatgcctctgaattttttaggcttcgtctaccgcgagatccgcggc
gccctggccaacatagagcgcatgtttagcttgctagacaggcagcctaagattgaggat
ggccccgatgcgacatcgccccagatcgcccaagggagccttaaatttgagggggtgagt
tttcgctacggtgacaggcctatcttgtccgatgtgagtttcgagatccccgccggtcac
aaggtggcgatagtgggggatagcggcgcgggaaaatccaccatagtgaagctgttgttt
cgcttctatgagacgcagcaggggactatcaccatagatggccatgataccaaggcgctg
actcaacacgcgctgcgtagcgccatcgccatagtgccccaagataccgtgttgtttaac
gactccctaatggagaatattcgttatggtctgccgggggcgagcgatgagcaggtgaag
gcggcgatagagctggcgcatctgtcaaacttcgtctcgcaactcagcgaaggctggcac
accaaggtgggtgagcgcgggttaaaactctccggcggcgagaaacagagggtggcgatc
gccagggcgatcctcaagggctcgcccctattggtgttcgatgaggcgacctcttcgctg
gatagccattcggagcaggcgatcctcaatgcgctcaaagagatggccaaggggcatacg
agtcttgttatcgcccacaggctgtcgacggtcgtggatgccgaccagatcttggtgctg
agtcagggcaagatagttgaacgtggcgatcatcagagcctgctggcggccgatggtctg
tataagaaattgtggaccgtacaaaatcagcattaa
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