Shewanella loihica: Shew_0919
Help
Entry
Shew_0919 CDS
T00489
Name
(GenBank) diguanylate phosphodiesterase
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
PTS_EIIC
Motif
Other DBs
NCBI-ProteinID:
ABO22790
UniProt:
A3QBE2
LinkDB
All DBs
Position
1040176..1042299
Genome browser
AA seq
707 aa
AA seq
DB search
MAVKDTSSSLFLIAIKESFIALLPFIFVNSLLALIVALVDVWQPSWQGSAAYAWLSQFGR
LLFSFFPLMALLSLSFHFAKYLHVSAVVVASLSIGSQIALHIHGSEAIDLSNGFDFLFGD
ARAIITPILVAYLLQRLMAIKALSLLQSTSLSSYLKLHLNLFIPLILCFVLVTTGIYWVG
ELLGMVLSPLVDSLAASSTLLQLFVRVLATHVLWCFGVHGDIAYMLVLGVDNGLQQVAPN
LTLSQFTDLFVLLGGSGATHSLLIALFIASKDKNAVNVAKLALPFALFNINEILIYGLPI
IFNPRLMLPFVLVPLFNTLIGTLLIVSGWVSFAGNDFAWITPIFLNGYVAGGTLALPLVQ
LLLVCAGVFIYLPFVRRYSLLVGNKGFERDLIKRVQLQQDIEKISERNYARQQSEDLAAN
LNLEKTIKAVLNGELLLYYQPKISLSDRRVVGYEALLRLRNERGQVEGPYFIPAFDQAGY
SNLIDSFVIRRLRDDLQAWAKQGFYPRVSINLNPNSVLSQDVQSMLIELLGDMADRVDIE
VLESMFVADLTAVEASMAYLRQYGFSFVLDDFGTGFSSISLLSKITIDGVKLDRSILENT
GHHKGQVLYRHTCMLCRSLGFNLVAEGVETKAEEAFVASAGVSTVQGWLYAKAMPAAEAK
RYALLQERFSEQAADSRGDSKAELKADVKADVKTEVKAGLKANSKTE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttggcggtcaaagatacctcttccagcctgtttctcattgcgataaaagagtcttttatt
gccctcttgccttttatcttcgttaactcgctgctggcactgatcgtcgccttggtggat
gtgtggcagcccagctggcagggcagtgccgcctatgcttggctgagtcagtttggtcgt
ctcctgtttagcttctttcccttgatggcgctgctctccttgtcatttcattttgccaag
tatctccatgtctcggcggtggtggtggcgtcgctctccatcggcagtcagattgccctg
catatccatggcagcgaggcaatcgaccttagcaacggcttcgactttctgtttggcgat
gccagggcgattatcacgccgattctggttgcctacctgctgcaacgcctcatggcgatt
aaggcgctgagcttgctgcaaagcaccagcctgagcagctaccttaagctgcatctcaac
ctgtttattcccttgatcctctgtttcgtgctggtgaccaccggcatctactgggtgggg
gagctgttgggcatggtgctgagtccgctggtggattcccttgccgccagcagcacactg
cttcagctgtttgtcagggtgttggccacccatgtgctttggtgcttcggtgtccatggg
gatatcgcctacatgttggtgcttggggtcgacaatggattacaacaggttgcgccgaat
ctgacgctgtctcagtttaccgatctcttcgtgttgctcggcggaagcggcgccactcac
tcgctgctgatcgccctgtttatcgcctccaaggataagaatgccgtcaatgtggccaag
ttggccttgcccttcgccctgtttaacatcaacgagatcctcatctacggcctgccgatc
atctttaaccccaggttgatgctgcccttcgtgttagtgcccctgtttaataccctgata
ggcaccctgttgatcgtcagtggctgggtgagcttcgccggtaacgactttgcctggatc
acccccatctttctcaatggctatgtggcgggcggcaccctggcgctgcccctggtacag
ctcttattggtatgcgccggggtttttatctatctgcctttcgtgcgccgctatagcctg
ctggtgggcaataagggattcgagcgggacctgatcaagcgggtgcagctgcagcaggat
atcgagaagatcagcgagcgaaactatgcccgtcagcagtcagaggatctcgccgccaac
ctaaacctggagaagaccattaaggcggtgctcaacggtgagttgctgctctattaccaa
cctaagatcagcctgagtgacaggcgggtcgtcggctatgaggcgctgctgaggctgaga
aacgagcgtggtcaggtggagggcccctattttattcccgccttcgatcaggcggggtat
tccaatttgatcgacagcttcgtcatccgccgcctgcgagacgacctacaggcctgggcc
aagcagggcttctaccccagagtcagcatcaacctcaatcccaatagcgtcctgagtcag
gatgtgcagtctatgctgatcgagctgcttggcgacatggcggacagagtcgatatcgaa
gtgctcgagtctatgtttgtggcggacctcactgccgtcgaggccagcatggcctacctg
cgccaatatgggttctcctttgtgctcgatgacttcggcacgggtttttccagcatcagc
ctgctgagcaagatcaccatagatggggtcaagctagacagatcgatattggagaatacc
gggcatcacaaggggcaggtgctctaccgtcatacctgcatgttgtgtcgcagcctgggc
tttaatctggtggccgagggggtagagaccaaggccgaggaggccttcgtcgcctcagcc
ggggtctcgacggttcagggttggctgtatgccaaggcgatgccggccgccgaggccaag
cgctacgccctgctgcaggagcgtttcagcgagcaggctgctgattcaaggggagactcg
aaggctgagttaaaggcagatgtaaaggcagatgtaaagacagaggtaaaggcagggtta
aaggccaattcaaagactgaataa
DBGET
integrated database retrieval system