Shewanella loihica: Shew_0922
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Entry
Shew_0922 CDS
T00489
Name
(GenBank) methyl-accepting chemotaxis sensory transducer
KO
K03406
methyl-accepting chemotaxis protein
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
slo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_0922
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Shew_0922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slo02035
]
Shew_0922
Bacterial motility proteins [BR:
slo02035
]
Flagellar system
Chemotaxis proteins
MCPs
Shew_0922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
TarH
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
ABO22793
UniProt:
A3QBE5
LinkDB
All DBs
Position
1047740..1049458
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AA seq
572 aa
AA seq
DB search
MSEHKRQEAHEMTAASTQGSGLMERIKSVRFQLKLNIFLIIFAFIFLGYKGITGMLDAGY
AIGDLYGQGMQHSIRAGKVLNELEKARSGLLLGFQHDPANAFADMHNHPLSFHIDASRAS
IKTLHDIIDNQILASDLADDERAEVNRLVSLLDKVTQEGFNPAIQALSQGEYKRSNQLLL
EKINPLFKDITDQAQAFLDMQIAEAKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSVF
IIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHAS
TSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQDA
NGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGT
EQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEISD
QTAEGARQSSDATEDLARLAESMEADIAHYKV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacacaaacgccaggaggcacatgagatgacggcagcgtccacccagggatca
ggcttgatggagcggatcaagtcggtaagatttcaattaaaactcaatatcttcttaatc
atcttcgccttcatcttcctcggctataaggggatcaccggtatgttggatgcgggatat
gccataggggatctctacggtcagggtatgcagcacagcatccgggccggtaaggtgctc
aacgagctggagaaggcccgcagcggattgctgctcggctttcaacatgatcccgccaac
gcctttgccgacatgcacaaccaccccctgagcttccatatcgatgccagccgggcctcg
attaagacgctgcacgacattatagataatcagatcttggcatcggatctcgccgacgat
gagcgcgccgaggtcaatcgcctggtgtcgctattggacaaggttactcaggagggcttt
aaccccgccatccaggccttgagtcagggagaatataaacgctccaatcagttgctgctc
gagaagattaaccccctgtttaaggatatcaccgaccaggcccaggccttcctggatatg
cagatcgccgaggctaagactagctatcaggcctcacaggagaccgtctccctctacatc
tggctggtggccatcttctctggcgtcgccatgcttgccatcagcgtcagctcggtattt
atcattcgccgggtgagcctgtctgtggtgcagctggaagagacggcggtggatatcgcc
gctggcgatctcaccaagcgtattcgcctcggcggccacgatgaatttgcccatatcgcc
gagcatgtgaatcgcatcgcaagcgatttccagcaggcggtgaccaacacccacgcctcg
acctcacgcctggccagcgcggcggaagagaatgccgtggtatcgactcagacccagcgc
aacgtgctggatcaacagcagcagacccagctgatcgccaccgccatccatgagtttacc
gccactgtgcgtgaggtggctcagagcgctgcctcggccgccaccgcctcccaggatgcc
aacggcgccgctcacggcgcccagggcgtggtggatgagagtatcgccgtgattgaggcg
ctggcgcaggagctgagccgagccagcgaggcgatgacactactagcccagcattccaat
gagataggcactgtggtggatgtcattcaggcgatctccgagcagaccaacctgctggcg
ctgaacgcggccatcgaggcggcgcgggcgggtgagcagggcagggggtttgccgtggtg
gccgacgaggtgcgctctctggcgaaacgcacccaggactctaccgaggagatccagaag
atgatccagcgcctgcaacagggggcgcgggactcgatgcagatgatgcagagcggcaca
gagcaggtgaaactcagcgtggataaatccttgatggttcgtgatgccctgcagcagatc
ttaaacagcatagaagagatcaacgccctcaacgcccagatagccaccgcctcggaggag
cagagctcggtcactgaggagatcaacatcaatatcaccaacatcagcgagatctcggat
cagaccgccgagggcgccagacagagcagcgatgccaccgaggatctggccaggctggca
gaatccatggaggcggatatcgcccactataaggtgtag
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