Shewanella loihica: Shew_0923
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Entry
Shew_0923 CDS
T00489
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
slo
Shewanella loihica
Pathway
slo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shew_0923
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slo01007
]
Shew_0923
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slo03016
]
Shew_0923
Enzymes [BR:
slo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Shew_0923
Amino acid related enzymes [BR:
slo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Shew_0923
Transfer RNA biogenesis [BR:
slo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Shew_0923
Prokaryotic type
Shew_0923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ABO22794
UniProt:
A3QBE6
LinkDB
All DBs
Position
complement(1049573..1052452)
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AA seq
959 aa
AA seq
DB search
MEKTYNPQSIEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQ
SGGTITKQLRRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLH
TAISDLEVENKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQSLIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLPMFNI
LTIDAAIRSQAEVVNSDGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLLGKIDPH
ALKVPYGDRSGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDEAGKVYVGRDEAEVRAKHNLDDSVVLRQDPDVLDTWFSSA
LWTFSTLGWPDDTEALKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT
VYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRK
EFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEEQD
CGPQSPNGKADGEMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQFCD
WYLELTKPVLQNGTEAEQRGTRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKPLAGVEGD
TLMLAEFPVYQASKVDEAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNAMLRSVSAQDK
ARVEANQTFFATLAKLESMTILADGDTAPMSTTQLVGEMELLIPMAGLIDVAAEMARIDK
QFEKLVGEAKRIEGKLNNQGFVAKAPEAVIEKERAKLAEFQRDMDKLCEQKAELAKLEG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatacaacccacagtcaatcgaacaggctctgtaccagaactgggaagag
aaaggatactttaagccccacggcgatgagtcgaacggcaattactgcatcatgatcccg
ccaccaaacgtgaccggtagcctgcacatgggtcatgccttccaagacaccatcatggat
accctaatccgttaccaacgcatgaagggcaagaacaccctgtggcaggtaggtaccgac
cacgcgggtatcgccacccagatgttggtggagcgcaaggtagaggccgaagagggcaag
agccgtcacgacctgggccgtgaaacctttatcgaccgtatctgggactggaaaaaccaa
tctggtggcaccatcaccaagcagctgcgccgcctgggcgcctcggtcgattgggatcgt
gaacgcttcaccatggatgaaggcatgtcagccgcggtacaagaggtgtttgtgcgtctg
tacaacgacgacctcatctaccgtggcaagcgtctggttaactgggatcctaagctacac
acagccatctcagacctcgaagtcgaaaacaaagagaagcagggcagcatgtggcacttc
cgctacccgctggccgacggcgcactgaccgccgacggtaaagactaccttgaagtggct
accacgcgtccagaaaccatgctgggcgacagcgcggttgccgtacacccagacgatgag
cgctatcagtcgctgatcggcaagttcatcctgctgccaatcgttaaccgtcgtatccct
atcgtcgccgacgactatgtggacatggagttcggtaccggctgtgtgaagatcaccccg
gctcacgacttcaacgactatgaggtaggtaagcgtcacaacctgcccatgttcaacatt
ctgaccatagacgcggccatccgcagccaggcagaggtggttaactcagatggcaccgcc
aacgacgagctagatggcagcctaccagagcgctttgccggcttggaccgtttcaaggcc
cgtaccgctatcgtcgacgagttcgagtcactcggcctgctgggcaagattgacccgcac
gccctcaaggtgccttacggcgaccgctctggcgtggtgatcgagccactactgacagac
cagtggtatgtagccgtggccccaatggccaagaccgccatcgaagcggttgagaacggt
gacatcaagtttgtgccgcagcagtatgaaaacatgtacttctcttggatgcgcgacatt
caagactggtgtatctcgcgtcagctgtggtggggtcaccgtatcccggcatggtacgac
gaggccggtaaggtatatgtgggccgcgacgaggccgaggtacgcgccaagcataatctg
gatgattcagtggtgctgcgccaagacccagacgtgctggatacctggttcagctcggcg
ctgtggaccttctcaaccctaggctggccagacgataccgaggccctcaagaccttccac
ccaaccgatgtgttggtgacaggtttcgacatcatcttcttctgggtggcgcgcatgatc
atgatgaccatgcacttcatcaaggatgaagatggcaagccacaggtgccgtttaagacg
gtgtatgtgaccggccttatccgtgacgaacagggcaacaagatgtccaagtctaagggt
aacgtactggatccgctggatatgatcgacggtatcgatctcgaagccctggttgagaag
cgcaccggcaacatgatgcagcctcagctggcggctaagatcgagaagagcacccgtaaa
gagtttgccgacggcatcgaggcccacggcaccgacgccctgcgtttcaccctggcagcc
atggcctctaccggccgtgacatcaactgggacatgaagcgtctggacggttaccgcagc
ttctgtaacaagatctggaacgcgtcgcgctatgtgttgatgaacacagaagagcaagat
tgtggccctcagtctccaaacggaaaagctgacggcgaaatgcagctgtcactggcggat
cgctggatcgtcggcctgtttaaccagacggttaaggcctttgacgagcacatggaaaac
taccgtttcgacctggcggccaacacactgtacgagttcacctggaaccagttctgtgac
tggtatcttgagctgaccaagccagtactgcaaaacggcaccgaggccgagcagcgcggt
acccgtcacaccctagtgacagtactggaagccatgcaacgtctgctgcatcctatgatg
ccatacctgacagagaccatctggcagcgcgttaagccgctggcaggcgtcgagggtgac
accctgatgctggccgagttccctgtatatcaggcaagcaaggtagatgaagccgccatg
gcggatcttgagtgggtcaagcaggtgatcgttgccgtgcgtaacatccgcgccgagctg
aatatcgccccaagcaagccgctcaatgccatgctacgcagcgtcagcgcgcaagacaag
gctcgcgtcgaagctaaccagactttcttcgccaccctggccaagctggagtcgatgacg
attctggcggacggtgacaccgcgcctatgtcgaccactcaactggttggcgagatggag
ctgttgatccctatggcaggccttatcgatgtggccgccgagatggcgcgtatcgacaag
cagtttgaaaaactagtgggcgaagccaagcgtatcgaaggcaagctcaataaccagggc
ttcgtggccaaggcgccggaagcggttattgagaaggagcgcgccaagctggccgagttc
caacgggatatggacaagctatgcgagcagaaagccgaactggctaagctcgaaggctaa
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