Shewanella loihica: Shew_0940
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Entry
Shew_0940 CDS
T00489
Name
(GenBank) permease YjgP/YjgQ family protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
slo
Shewanella loihica
Pathway
slo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew_0940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0940
Transporters [BR:
slo02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Shew_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ABO22811
UniProt:
A3QBG3
LinkDB
All DBs
Position
1081337..1082449
Genome browser
AA seq
370 aa
AA seq
DB search
MIVFRYLIREVLKAQMAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLA
VLVVPLSLFLGILVAHGRMYAESEMVVFHSVGVSEWYVTRVTLLLAVANMLFTGFLVIYV
TPWAEETQNRVLENAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPD
PEDGASQSNIVVAQGGSVIEDESGEQRLKLNDGIQYQSKQNQLDYQVVQFAGYEMQIKEQ
EVDQRRRKLSALPIDQLLDTEGPEAVAEFHWRLAIPLAIPFMTLIAVPMARVNVRQGKFA
KMFPAILLYLGYFGLMIAGRKALEDEVIPAYLGMWWIHASALFLGMLLLSKERPAGAKLS
GLLKRKKVAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagatacttgattcgtgaagttttaaaagcgcagatggcagtgctttta
gtactgttagctatttttattagccaacattttgttcgtgtactcgctgatgcatccgat
ggcgagtttcccgcctctctggtgatgaccctcctaggccttaatcttccctatcttgcc
gtgcttgtggtgcctctgagtctgtttttggggatcctggtggcccatggccgtatgtac
gccgaaagcgagatggtggtcttccacagcgtcggcgtgagtgaatggtatgtcactcgg
gtgaccctgctactcgccgtcgccaacatgctgtttaccggctttttagtcatctatgtc
accccctgggccgaagagacccaaaaccgtgtgcttgaaaatgcccagtcggaggcaggc
ctggcggcattgacccaggggcgtttccagaccagtcctaacggccgcgcggtactcttc
gtcgagcggatcggccgtgacaatcaactggataaggtgttcgtggctcagctaccagac
ccggaagatggcgccagccagtccaatatcgtggtggcccaagggggcagcgtgatcgag
gatgaaagcggcgagcagcgcctcaagctcaacgatggtatccagtaccagagcaagcag
aatcagctcgattatcaggtggtgcagtttgccggttacgagatgcagatcaaggagcag
gaggtggatcagcgccgccgcaaactgtcggccttgccaatcgaccagctgctggatacc
gaggggcccgaggccgtggccgagttccactggcgtctggccatcccgctggcgatccct
ttcatgacgctgatcgctgtgcccatggcgcgggtgaatgtgcgccagggtaagtttgcc
aagatgttcccggcgatcttgctctatctgggttatttcggcttgatgattgccgggcgc
aaggcgctcgaagatgaggtgatcccagcctatctcggtatgtggtggatccatgcctcg
gcgctgtttttagggatgttgctgctgagtaaggagcgccccgcgggggctaagctttct
ggcttgctaaagcgtaagaaggtggcggcatga
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