Shewanella loihica: Shew_0973
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Entry
Shew_0973 CDS
T00489
Name
(GenBank) extracellular solute-binding protein, family 1
KO
K11073
putrescine transport system substrate-binding protein
Organism
slo
Shewanella loihica
Pathway
slo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew_0973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0973
Transporters [BR:
slo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putrescine transporter
Shew_0973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABO22844
UniProt:
A3QBJ6
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All DBs
Position
1117707..1118807
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AA seq
366 aa
AA seq
DB search
MKLLKKMTTLALVTAGVFTSSVVSAEEVVRVYNWSDYIAEDTLANFEKETGIKVIYDVFD
SNEVVEAKLLSGRSGYDIVVPSNNFLAKQIKAGAFQKLDQSQLTNHKNLNPELMKQLETA
DPRNEHAVPYLWGTTGIGYNEAKVKQVLGEDAPVDSLELIFNPKYAEKIAKCGFSLLDSA
DEMLPMAMIYLGLDPNSTKSEDYAKAGEVMAKIRPFVTYFHSSRYITDLANGDICVAFGY
SGDVFQAAARAEEAENGNVIGYAIPKEGSNLWFDMLAIPADAKNVKNAHTFINYLLRPEV
IAPITNYVAYANPNVPAQELVDEEIRNDAAIYPTPEVLSRLYVADVRPMKAQRAMTRVWT
KVKSGM
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttaaagaaaatgacaacactcgctctggtcaccgccggggtatttacaagc
tctgtcgtcagtgctgaagaggtggttagggtctataactggtctgattatatcgccgaa
gacaccttggctaatttcgagaaagagacaggcatcaaggtgatctacgatgtgttcgac
agcaacgaagtggtcgaggccaagttgctatcgggtcgttcaggctatgatatcgtggtg
ccgtcaaacaacttcctggctaagcagatcaaggcgggcgccttccagaagttggatcag
tcacagctgaccaaccacaagaaccttaatcctgagctgatgaagcagcttgaaactgcc
gatccacgtaacgagcacgccgtgccttatctgtggggcaccacaggcataggttacaac
gaggccaaggtgaagcaggtactgggtgaagacgcgccggtcgattctttggagctgatc
ttcaatcctaagtatgccgagaagattgctaagtgtggtttctcactgctggacagcgcc
gacgagatgctgccgatggcgatgatctacctggggctggatcctaacagcactaagagt
gaagactacgccaaggcgggtgaggtgatggcgaagatccgtcccttcgtgacctatttc
cactcatcacgttacattaccgatctggccaacggcgacatctgtgtggcattcggttac
tcgggtgacgttttccaggccgccgcgcgcgccgaagaggctgagaatggtaatgtgatc
ggctatgccatcccgaaagagggttctaacctttggttcgatatgttggcgattcctgcc
gatgccaagaacgtgaagaacgctcacacctttatcaactacctgctgcgcccagaggtg
attgcccctatcactaactatgtggcgtacgctaaccctaacgtgccggcccaggagctg
gtggatgaagagatccgtaacgacgcggctatctatccaacccctgaagtgctgtcacgt
ctctatgtggccgatgtacgtccgatgaaggcccagcgcgccatgactcgcgtatggacc
aaagtcaaatctggcatgtaa
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