Shewanella loihica: Shew_1084
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Entry
Shew_1084 CDS
T00489
Name
(GenBank) PAS/PAC sensor hybrid histidine kinase
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_9
Response_reg
HisKA
PAS
PAS_8
PAS_4
SPOB_a
MEKHLA
Motif
Other DBs
NCBI-ProteinID:
ABO22955
UniProt:
A3QBV7
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Position
1248034..1250070
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AA seq
678 aa
AA seq
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MDSSVFKDLSQSEFMDFGPALIAQLGKLQGQFIRGDDVLLPLCRILADSSGAESVMILSR
RLLASDEMPADVTCWCRDSMRYITLWRQVKDWPLLDGQRGAHQWQRFVVWPIEGLDVNIF
FYRPGKGWLSFLTSYQTFIADSISGMLLQQSQDWQQSRNAQIIKSIDTQMYQSIVSNSED
MIVVASRQKGMAPVIMYANAAATAISQYPRSQLIGKSIELFFGDQDDKALELLEAIELRL
EFTGELVCSTATGEKVILHTHLIALNEQYEDGSLFTLVGRDITEQKLMQNTMARTQKMQA
MGQLVGGVAHDFNNILGVLKGNLELMELKGKDESIARYLATALKACQRGTDLTRRLLQFS
RQEQFSAQPVQVNEVLQSLEELLEKSLTTQVSLNIQPQPSMRDICVDRGDLEDALINLVL
NAKDAMHGEGQITIVTGEQYLSGYLPGVGNTVSTDNRDYVWVSVIDQGGGIPDNLLDKIF
EPFFTTKDKSKGTGLGLSMVYGFVKRSNGYMSIMRTGADGTEIRLWFPAIKPVERQIERQ
HSPLEYPKVAHPIKVLIVDDEPDLLEVLCDYCQMMGMEVLAYTDPLLVKEQFKDGIDNID
LIISDLLMPGGINGYELVTDLSVHRTIPVLLISGYVGDVGISSREDLPFQVLQKPFDIRA
FVRGLEEIGIEFVQGELR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggactctagcgtgtttaaggatctctctcaatctgaatttatggactttggcccggcc
ttgatcgcccaactggggaagttacagggacagtttattcgcggtgacgatgtgctcttg
cccctgtgtcgtatcctggccgatagcagcggcgccgaatctgtgatgattctctcccgt
cgcctgctggccagcgacgagatgccggccgatgtgacctgctggtgtcgggattccatg
cgttatatcaccctgtggcgacaggtgaaagactggccgctgctggatggccagcggggg
gcacaccagtggcaacgcttcgtggtttggcccatcgaggggctcgacgtcaatatcttt
ttctatcgcccgggcaagggctggctgtcgtttctcacctcctatcagaccttcattgcc
gacagcatcagcggcatgttgctgcagcagagccaggattggcagcagagccgtaacgcg
cagatcatcaagtctatcgacacccagatgtaccagtctatcgtcagtaatagcgaagat
atgatagtagttgcgtcgcgtcagaaggggatggcaccggtgatcatgtatgccaatgcg
gcggcgaccgccatcagccaatatccgcgcagtcagcttattggcaagtcgatcgagctc
ttcttcggcgatcaggacgataaggcgctggaactgctggaggcgattgagctgcgcctt
gagtttaccggcgagctggtctgctctaccgccacgggggagaaggtgatcctgcatacc
catctaattgccctcaacgagcagtatgaagatggcagcctgtttaccctagtgggccgg
gacatcacggagcagaagctgatgcaaaataccatggcccgcacccagaaaatgcaggcc
atgggtcagctggtagggggcgtggcccacgatttcaacaacatcttaggtgtgctcaag
ggcaacctggagctgatggagcttaagggcaaggatgagtctatcgcccgctatctggcc
acggcgctcaaggcctgtcagcgcggaaccgacctgacgcggcgtctgctgcagttttcc
aggcaggagcagttcagtgctcagccggtgcaggtcaacgaggtgctgcagagcttggag
gagctgctggaaaaatccttaaccacccaggtgagcctcaacattcagccccagccatcg
atgcgggatatctgtgtcgatcgcggcgacctcgaagatgcgctgatcaatctggtgctg
aatgccaaagatgccatgcatggggaaggacagatcaccatagtgaccggtgagcagtat
ctgtctggctatcttcccggcgtgggcaataccgtcagcacagataaccgggattatgtc
tgggtgtcggtgatcgatcagggcggagggatcccagataacctgctggataagatcttc
gagccattttttaccaccaaagataagagcaaggggaccgggctcgggctctccatggtg
tatggcttcgtcaaacgctccaacggatatatgagcatcatgcgcacgggtgctgatggc
actgagatccgcctttggtttccggccatcaagccagtcgagcggcagattgagcgccag
cacagtccgcttgagtatcccaaggtcgcgcaccccatcaaggtgcttatcgtcgatgat
gagccggatctgctcgaggtgctgtgcgattactgtcagatgatggggatggaggtgctg
gcctatacggatcctctgctggtcaaggagcagtttaaggatggtatagataatatagac
ctcatcatctcagatctcttgatgccggggggcattaacggctatgagctggtgaccgac
ttgagcgtgcatcgaacgattcctgtgctgctgatctcaggctatgtcggcgatgtcggc
atcagcagtcgggaagatctgccgtttcaggtgctgcagaaacccttcgatatccgcgcc
ttcgtacgtggcctcgaagagatagggattgagtttgtacaaggagaattgcgatga
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