Shewanella loihica: Shew_1090
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Entry
Shew_1090 CDS
T00489
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1090
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_1090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Porin_4
Phenol_MetA_deg
OprF
TSP_3
Opacity
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ABO22961
UniProt:
A3QBW3
LinkDB
All DBs
Position
complement(1255197..1256300)
Genome browser
AA seq
367 aa
AA seq
DB search
MMNNTLKAILLTSMLPFAANAAQELTPWYVGGGLGVNNYEPNCDQKTMKQCGEDDPYAWD
VFGGYLFNDYFGVELGYRDLGRAEWVDYANKLNDVGARGMTLGLVGFWPFADRWSLSAEA
GAMNYLLSNNKQWGSEYYSDSGVAPYFGAGIGYNFTDNLKLQAKYRRYENLDEDKWNTLD
MESNYWGLELSYRFGRAAPAAVAAPVVVAPKDSDNDGVTDDKDQCANTPSNHKVDANGCT
VYREVTEKHELGSIRFANNSAVVNSASYGQIEKLANYMNQNPRATVLIGGHASNVGNPDY
NMDLSERRANAVAELLVSKYGISQDRVSAKGYGITQPLIEGKSAEANKANRRIEAHVTGV
RKEPVLK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatacattgaaagctattctgcttacatcaatgctcccatttgcagccaat
gcagcacaagaactcaccccttggtatgtcggtggcggtttaggcgttaacaactacgag
cctaactgcgatcagaagaccatgaagcagtgtggtgaagacgatccttatgcttgggac
gtatttggtggttacctctttaacgactatttcggtgtcgagctaggctatcgtgacctg
ggccgtgccgagtgggtcgactatgccaacaaacttaacgacgtcggtgctcgcggtatg
acacttggcctggtaggtttctggccatttgccgaccgttggagcctgtctgccgaagcg
ggtgcaatgaactacctactgtcaaacaacaaacagtggggtagcgagtactacagcgac
agcggtgttgcaccttactttggtgcgggtatcggctacaacttcaccgacaacctcaag
ctgcaagccaagtatcgtcgttatgagaatctcgacgaagacaagtggaacacacttgat
atggaaagcaactactggggtcttgagctgagctaccgcttcggtcgcgcagcaccagcc
gctgtagcagcacctgtggttgttgcaccaaaagattcagacaacgacggtgtgactgac
gacaaagaccaatgtgccaacacaccaagcaaccacaaggttgatgccaatggttgtacg
gtttaccgcgaagtcaccgaaaagcatgaactgggttcaattcgctttgccaacaactca
gccgtggtgaactctgcgtcttacggtcaaatcgaaaagttggccaactacatgaaccaa
aacccacgcgcaaccgtgttgatcggtggtcacgcctctaacgtaggtaacccagactac
aacatggatctgtcagagcgtcgtgccaatgccgttgccgaactgctggttagcaagtac
ggtatcagccaagatcgcgtcagcgctaaaggttacggtatcactcagcctctgatcgaa
ggcaaaagcgccgaagccaacaaggctaaccgccgcatcgaagcccacgtcactggcgtg
cgtaaagagccggttctaaagtaa
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