Shewanella loihica: Shew_1168
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Entry
Shew_1168 CDS
T00489
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
slo
Shewanella loihica
Pathway
slo00500
Starch and sucrose metabolism
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
Module
slo_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Shew_1168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slo04147
]
Shew_1168
Enzymes [BR:
slo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Shew_1168
Exosome [BR:
slo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Shew_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
GlgB_N
Alpha-amylase
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
ABO23038
UniProt:
A3QC40
LinkDB
All DBs
Position
1346226..1348523
Genome browser
AA seq
765 aa
AA seq
DB search
MTKQIPVQTPAQTPLIAPSEIEALLAADYVDIFALLGMHAIEMAPATKSSKGIKEAKAVS
LVKRLVVRCFLPGAERVELIAKQDGRKVAELDKCHDEGIFAGLAGRRINPFEYRLRVHYP
FSVEEINDPYQYASLLSDEALYLFSEGRQEQAYRFMGANWREVDGVSGVQFCVWAPNAKR
VSLVHDAIDWDGRRQVMRHHPANGVWEIFIPSMKALTHYKYEIVTQEGERLLKADPFGRA
MQGAPGNASIVPPQLDYAWQDKRWLAKRAKQSWHDQPISIYEVHLGSWRRQGENGEQYLS
YSQLIDQLIPYVVEMGYTHLQLMPLCEYPFDGSWGYQPVGLFAPTHRFGQPHELKAFVDA
CHQAGIGVILDWVAAHFPKDPHGLTRFDGSCLYEHEDPRQGEHPDWDTLIYNYGRGEVQS
YLLSNAHYWLQEFHLDGLRLDAVSSMLYLDYSREPHQWLPNAHGGRENLDAIAFLQDLNT
RLYQGFPGIMMIAEESTAWPGVTKRVDEGGLGFGFKWNMGWMNDSLNYIGRDPIHRSHHH
NELTFSLMYCFTEQFILSLSHDEVVHGKGSLLHKIPGDDWQKFATLRAYLGFMWGHPGKK
LLFMGADFAQRDEWDHQHSLDWHLLAFEPHQGMQRWVKDLNSLYRQSVALYGDDHHGEGF
SWLDCDNASASVLSFIRQSGDKQLIFIVNMTPEVYREFRIGLPQPGRYHERLNSDSHYYG
GSDVGNQGVIHTEPEAYQGQAQSACISVPPLACLVLELDESVSCD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcagataccagtgcagacacctgcgcagacaccactgatagcgccaagtgaa
attgaagccctgctggctgccgactacgtggatatcttcgccttgttggggatgcatgct
atagagatggctccggccactaagtctagtaagggcatcaaggaggctaaggcggtaagc
ctggtcaaacgcctggtggtgcgctgttttctgccgggggcagagcgggttgagctgatc
gccaagcaagatggccgcaaggtggccgagctggacaagtgccacgatgaggggatcttt
gccgggctcgccgggcggcgcatcaaccctttcgagtatcgcctgcgagtgcattatcct
ttcagcgtcgaggagataaacgacccttaccaatatgccagcctgctgagtgatgaggcg
ctgtacctcttcagcgaggggcgtcaggagcaggcctatcgtttcatgggggccaactgg
cgtgaggtcgatggggtgagcggcgtgcagttttgtgtctgggcgcccaatgccaagcgg
gtctctctggtgcacgatgccatcgactgggacggcagacgtcaggtgatgcgccaccat
ccggccaatggcgtgtgggagatcttcatcccctcgatgaaggcgctgacccactataaa
tatgagattgtcactcaggagggagagcgactgctcaaggccgatcccttcggccgcgcc
atgcagggcgccccgggtaacgcttcaatcgtaccgccccagctcgactatgcctggcag
gataagcgctggctggcgaaacgggccaagcagagctggcacgatcagcccatctccatc
tatgaggtgcatcttggatcctggcgtcgccagggggaaaacggcgagcagtatctcagc
tatagccagcttatcgatcagctgatcccctatgtggtcgagatgggctacacccatctg
caactgatgcccctgtgcgaatatcccttcgacggctcctggggctatcaaccggtcggc
ctgtttgcgccgacccacagattcggccagcctcacgagctcaaggccttcgtcgatgct
tgtcatcaggccggcataggggtgatcctcgactgggtcgcggcgcatttccccaaggat
ccccatggactgacccgcttcgacggctcctgtctctatgagcatgaggatccccgtcag
ggagagcatccagattgggatacccttatctacaactatggccgcggcgaggtgcagagc
tatctgctcagcaacgcccattactggctgcaggagtttcatttagatggcttgcgcctg
gacgccgtctcttccatgctttatctcgactacagccgcgagccccatcagtggctgcct
aacgcccatggcgggcgcgagaatctggatgccatcgccttcttgcaggacctcaacacg
cgtctctaccaaggctttcccggcatcatgatgatcgccgaagagtccaccgcctggccc
ggtgtcaccaagcgggtcgatgagggcggcctgggcttcggctttaagtggaatatgggc
tggatgaacgacagcctgaactatatcggccgggatcccatccatcgtagccatcatcat
aacgagctgaccttcagcctgatgtactgcttcaccgagcagttcatcctgtcgctgagc
catgacgaggtggtgcatggcaagggctccttgctgcataagatccccggcgacgactgg
cagaagtttgccaccctgcgggcctatctgggcttcatgtggggccatcccggtaagaag
ctgctcttcatgggcgcagattttgcccagcgcgacgagtgggatcatcagcatagcctc
gactggcacctactggcgttcgagccccaccaggggatgcagcgctgggtgaaagatctc
aacagcctctatcgtcagagcgttgccctctatggcgacgatcaccacggcgagggcttt
agttggcttgactgcgataacgccagcgccagcgtactgagttttatccgccagagcggc
gacaagcagctgatctttattgttaatatgaccccagaggtctaccgtgagtttcgcatc
ggtctgccgcagcccgggcgctaccatgagcgcctcaacagcgacagccactattatggc
ggcagcgacgtgggcaatcagggggttatccacaccgagcccgaggcctatcagggccaa
gctcagagtgcctgcatcagcgtgccgccgctggcctgtctggtgctggaactggacgag
agtgtgtcatgcgactga
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