Shewanella loihica: Shew_1179
Help
Entry
Shew_1179 CDS
T00489
Name
(GenBank) type IV pilin biogenesis protein, putative
KO
K02674
type IV pilus assembly protein PilY1
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slo02044
]
Shew_1179
02035 Bacterial motility proteins [BR:
slo02035
]
Shew_1179
Secretion system [BR:
slo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Shew_1179
Bacterial motility proteins [BR:
slo02035
]
Pilus system
Pilus assembly proteins
Shew_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ABO23049
UniProt:
A3QC51
LinkDB
All DBs
Position
1366677..1370291
Genome browser
AA seq
1204 aa
AA seq
DB search
MDILRAGQSALANIIMQRKGELVKSFVALLTAIMSLLSASSWADDTELYVYEASARTGAR
PQILIIFDNSGSMSTKVYDVDKPYTPGAGGGSRYNNGKKGMLYYVKGDQGKNKLPDPDDP
NERRKFSGTINSCGSSWEFLNDYGIFTGFFRKYTFSGANGAWREFGDNNGLNAKAVDCYE
DIQEGNYLNAKGLTSGLPVDSLGSPTTPIMYNNVSSSSSDSIKKTAKEQAQLTGFGTGRV
LTVYTEDYLRWHHNANKKQEDKTRLELAKDAIKNVILTTPGVDFGLAIFNMNGPDDTLYN
GRNGGRIIKAIQTLTPGQKKTLLSGVKDIEYGWNTPLCETLYEAYRYFAGKSVEFGDDDK
DYTYESWGRWVTYRANKNDSLDKDALVKGTNTYQSPFKKCQNNAYIVFITDGEPTLDSAA
DVEVTKLTGGVDKHSTSYMSALSSWMYRKDVNPNMDGDQHVITHTIGFSEGAKNAEDLLK
KVASKGGGSYFDATDATKLQGSIQQAVNEVLANSASFTSPSVASNNFNRTQTFNYAYYSM
FLPDRGPRWTGNIKKFRVAADGTVLDAEGKIALGDDGNIKDSACSYWTPKKLCGDGNDVR
KGGVLSAMQSADSRTLYSNLGGGMDTLSLSAAATKAGGQEDLANFMGVDKSQLTNLFDWA
KGLDVDNDKNQTTIADPAKNWRNDIMGDALHSKPLALNFGSKSSPDIRILVGTNHGFMHM
FKDDTTANEVSESWAFMPYELLPNIQTLRNNVPTGVHSVYGIDGSPVAYVKNGASGVEKA
WLFFGMRRGGDSYYALDISNPDSPSFKWRIDASSPGLSELGQSWSTPVVTTIRSASGTEK
PVLIFGAGYSPAGKDGKDLGTKDNKGRGVFIVDADTGKLIHQFGAGGGTALPGIQDSIPS
GVAVLDASGDGNTDRIYAVDTGGSVWRMDMPRADKASWSAFKFADLGGKSLLQNRRFYSA
PVVAQTMINNVSVVDYTVNGKTTRVTTSQNVPYDAVVVGSGHRAAPSDTSREDMFFTLQD
RNVVTQTFGGTGRPKAPAPLTLSDLYETTKLKANQAPDKIAISKKRGWYFKLPGLGEKNL
SPATIINGQVFFTTFVPGTAASNNQCLTSGMGFLYPFNLHYGTSNYTSVALEAGNLVLDT
PQLVIPADNKGGQGKDGDAYMYLIGIGNAAEKMEKVKPDDDCPAGDNRCIGGRLRAHKIY
YYSE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggatattttgcgcgctggtcagtctgctctggcaaatatcataatgcagcgaaaggga
gagcttgtgaaaagctttgttgctctgttgactgccatcatgagtcttctctcggcttct
tcgtgggccgacgataccgagttatatgtctatgaggcgagcgcccgtactggggctagg
ccacaaatcctgatcatcttcgataactctggcagtatgagcaccaaagtctatgacgtg
gataaaccttatacgccgggagctgggggcggctcgcgttacaataacggcaagaaaggg
atgctctattacgtaaaaggtgatcagggtaagaataagttgcccgaccccgatgaccct
aatgaacgacgtaaattttcaggcaccatcaatagctgcggtagctcctgggagttcctg
aacgactatggcatctttaccggtttcttccgtaagtatacctttagcggtgccaacggt
gcctggcgtgagtttggcgataacaatggtctgaatgctaaggcggtggattgctacgaa
gatattcaggaaggcaattatcttaatgctaagggattaacctcggggctacctgtcgat
agtttgggatctcccaccacgcctatcatgtataacaatgtcagcagtagttcgagtgat
agcatcaagaagaccgccaaggagcaggcgcagcttaccggctttggtaccgggcgggtg
ctcaccgtgtataccgaggattaccttcgctggcatcacaatgcaaacaagaaacaagaa
gataaaactcgcttagagctggccaaagatgcgattaaaaacgtcatcttaaccaccccg
ggagtggatttcggcctggcaattttcaacatgaatggcccagatgacaccctatataat
ggccgtaacggtgggcgcatcatcaaagccattcagaccctgacgccagggcaaaaaaag
acactactcagtggggttaaagatattgagtatggctggaacacccccctgtgtgaaacc
ctttacgaggcctatcgttacttcgccggtaagtctgtggagtttggcgatgatgataag
gattatacctatgaatcatggggccgatgggtaacttatagagccaataaaaatgatagt
ttggacaaggatgcgcttgttaagggaacaaatacctatcaatccccctttaagaagtgt
cagaacaacgcctatatcgtcttcataacagatggggaaccgaccctagacagcgccgcc
gatgtggaagtcacgaagttaaccggtggcgtcgataagcacagcactagttacatgagc
gcgctgtcgagttggatgtatcgcaaagatgtaaaccctaacatggatggcgatcagcat
gtgatcacccacaccattggcttcagtgagggggcaaaaaatgccgaagatctgttgaag
aaggtggcgagcaaggggggcggaagctatttcgatgccaccgatgcgactaagctgcag
ggctctattcaacaggcggtgaatgaggtgttggccaacagcgcaagttttacttctccc
tctgtggccagcaacaactttaaccgtacccagacttttaactatgcctattactccatg
ttcctgccggacagaggtccgcgctggacggggaatatcaagaagttcagagtcgccgcc
gatgggacagttttggacgcagagggtaaaatagcgttgggtgatgacggtaacatcaag
gatagcgcctgctcctactggacgcccaagaagctttgtggcgatggcaacgatgtgcgc
aaggggggcgtcctgtcggcgatgcagagtgccgatagccgaaccctatacagtaatttg
gggggcggcatggatacgctcagcctgtcggcggcggccaccaaggcaggtggtcaggaa
gacctggccaatttcatgggtgttgataagagtcagctcactaacctattcgattgggct
aaggggctggatgtggacaacgacaagaaccagacgaccattgccgatcccgccaagaac
tggcgcaatgacatcatgggtgatgcccttcactctaagcctctggcattgaactttggc
agtaagtctagcccggatatacgtatcctggttggtaccaaccatggcttcatgcatatg
ttcaaggatgacaccactgccaacgaggttagcgagagctgggccttcatgccttatgaa
ctgctgccaaatatccagaccctgagaaacaatgtgccgacgggcgtgcactcagtctat
ggtatcgacggctctcctgttgcctatgtgaaaaatggcgcctcaggtgtagaaaaagct
tggctcttcttcggcatgcgtcgcggtggtgatagttactatgccctggatatcagcaac
cctgattcgccaagcttcaagtggcgtatcgatgccagctcgccgggcctgagtgagctt
ggacaatcctggtcgacacctgtggtgaccacgattcgcagtgccagcggcacggaaaaa
cctgtgctcatcttcggtgctgggtattcacctgcgggtaaagatggtaaagaccttggc
actaaggataacaaagggcgtggcgtgtttatcgtcgatgccgataccggcaaactgatc
catcaatttggcgccggtggcggcacggccctgccagggattcaggacagtattcctagc
ggtgtggcggtactcgatgccagtggcgatggcaataccgaccgtatctatgcggtcgat
accggtggtagtgtctggcgcatggatatgccaagggcggataaggctagctggtcagcc
tttaagtttgccgatctaggtggcaagtcgctgctgcagaatcgtcgcttctactcggcc
ccagttgtggcgcagaccatgattaacaatgtctcagtggttgattatacagtcaatggc
aagactactagggtaaccacgagtcagaatgtaccttacgatgccgtggtggtgggcagt
ggccacagggcggcgccgtccgatacctcccgcgaagacatgtttttcaccctacaagat
agaaacgtggtgactcagaccttcggcggcacgggcaggcctaaggcgccagcgcctttg
actcttagcgacctctacgaaacgaccaagttgaaggctaatcaagcgcccgacaagatt
gctattagtaagaagcgcgggtggtattttaaacttcctgggcttggtgagaagaatctg
tcaccggcgactatcattaacggtcaggtgttcttcacgacctttgtgccgggtacagca
gcgagtaacaaccagtgcttaacgtcaggcatgggcttcctctatccctttaatctgcac
tatggcacgagtaactacacgtcggtcgctctagaggcgggtaacttggtattagacact
cctcagcttgtgatccctgccgacaacaagggggggcaaggaaaggatggtgatgcctac
atgtatctgatcggcataggtaacgccgccgagaagatggagaaggttaaacccgacgac
gattgccccgccggggacaatcgctgcataggtggccgactgcgtgctcataagatctac
tactatagcgagtag
DBGET
integrated database retrieval system
