Shewanella loihica: Shew_1200
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Entry
Shew_1200 CDS
T00489
Name
(GenBank) Hpt sensor hybrid histidine kinase
KO
K07678
two-component system, NarL family, sensor histidine kinase BarA [EC:
2.7.13.3
]
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_1200
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
slo01001
]
Shew_1200
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
slo02022
]
Shew_1200
Enzymes [BR:
slo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Shew_1200
Protein kinases [BR:
slo01001
]
Histidine kinases
NarL family
Shew_1200
Two-component system [BR:
slo02022
]
NarL family
BarA-UvrY (central carbon metabolism)
Shew_1200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_4
HATPase_c
Response_reg
HisKA
Hpt
HAMP
HAMP_2
PDE8A_N
DUF4795
DUF4349
Motif
Other DBs
NCBI-ProteinID:
ABO23070
UniProt:
A3QC72
LinkDB
All DBs
Position
complement(1390960..1393761)
Genome browser
AA seq
933 aa
AA seq
DB search
MNSADNMTKYSLRAWVLVLALAPTILVGILLGSYFTINRFYELEESLIERGGNIIEPLAI
SAEIGLETKNFETTKRLITSVQLNKSNLVQFIAIFDTNNRVIVTSHHYKSHEFMRYNEPI
DSLQNTEVEQFGDSIIMRSPIFSSQRELVVSPYDSNSMAQQVNSAKLGYIAVLLNKENAL
LEQHRAAVAAFIIVLIGVQLNLLFTFRLVKNVTHPITEMVRVVAKIREGKLDTRVDGNLI
GELDLLKRGINAMAGSLSEYHEEMQQNIDQATSDLRETLEQIEIQNVELDLAKKRALEAS
RIKSEFLANMSHELRTPLNGVIGFAKQLLKTPLHASQQDYIKTIEKSATNLLGIINDILD
FSKLEAGKMELENMPFALREVIDDTISLLANSAKEKDLELVVDIEPSINDNVSGDALRVS
QVITNLVGNAIKFTDSGSVHLKMRLTSEEAEKVNVRCEITDTGIGIDKPHQAQLFQAFGQ
ADSSISRRFGGTGLGLIITKRLINRMGGQIGCISAPGKGSTFWFTLPLKLSPYPISQPLE
TDNLIDKTVLLFEPRELSRKVHESLLSHWGMQNISITTAEDLARVAGEEGRHFDYAIISC
NDLASSPNLLNVLNKIAKISDYTLYLCSSTDSAAKMSLIQPNVDKVMQAPVGERALAVTL
INPHRAQYEAMPFQEAVKETQEREPMSVLAVDDNPANLKLIKTLLKELVTQVTVTDNGQE
AVEIAKAKSFDLIFMDIQMPGTDGFSATKQIREHSLNRNTPIVAVTAHAIAEERERIDQS
GMDGYLPKPIDEAALKSVISRWKTRPQFTHFDQHTLNWDLCLTQANQKTSLALEMLQMLV
DSLPETREHISGALERQDSQAMVSHVHKLHGASCYCGVPTTQRLCREIEQSLKQNASVDL
VEPEILELLDELSKVESAANQVIAQLSMDVIDE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgcagacaatatgactaaatacagcctgagagcctgggttctcgtgctggcc
ttagcgcccactattttggttggtattttacttggcagctattttaccataaatcgtttc
tatgagctggaagaaagcttaatcgaacgaggcggcaatatcatcgagccgctggccatc
tccgccgagataggcctggaaaccaaaaacttcgagaccaccaaacgcctgatcacctcg
gtgcagctcaataagtccaacctggtgcagtttattgccatcttcgacaccaacaaccgg
gtgatagtgacctcacatcactataagagccacgagtttatgcgctataacgagcccatc
gactcgctgcagaacacagaggtggagcagtttggcgacagcatcatcatgcgcagcccc
atcttctccagtcagcgcgaacttgtggtcagcccctacgacagcaactccatggcccag
caggtcaactccgccaagctcggctatatcgccgtgctgctcaacaaggagaacgccctg
cttgagcagcacagggccgcggtggccgccttcattattgtcctgatcggggtgcagctg
aacctactgtttaccttccgcctagtgaaaaacgtcacccaccccatcacagagatggtg
cgcgtggtagccaagatccgcgaaggcaagctggacacccgggtcgacggtaacctgatt
ggtgagctagacctgctcaagcgaggtatcaacgccatggcgggctccttgtcggaatac
catgaggagatgcagcagaatatcgatcaggccacctcagatctgcgcgagaccctggag
cagatcgagatccaaaacgtcgagctggatctcgccaagaagcgcgccctagaggccagc
cgcatcaagtcagagttcttggccaacatgtcccacgagctgcgcacgccgctcaacggg
gtgatcggcttcgccaaacagctattgaagacgccgctacacgccagtcagcaggactac
atcaagactatcgagaagagcgccaccaacctcttggggatcatcaacgacatcctcgac
ttctctaagctggaggcgggcaagatggagctggagaacatgccctttgccctgcgtgag
gtgattgacgacaccatctctctgctggccaacagcgccaaggagaaagatctcgagctg
gtggtagatatcgagcctagcatcaacgacaacgtctcaggcgatgccctgcgggtcagc
caggtgatcacaaaccttgtgggcaacgccatcaagtttaccgacagcggcagcgtgcac
ctcaagatgcgcctgaccagcgaagaggccgagaaggtcaacgtgcgctgcgagatcacc
gacacaggcataggcatagacaagccccaccaggctcagctgttccaggccttcggccag
gcagactcctctatctcgcgtcgcttcggcggcactggcctcgggcttatcatcaccaag
cgtctgatcaaccgcatgggcggccagattggctgtatctcggcgccgggtaaaggctcg
accttctggttcaccctgcccctcaagctgagtccctaccccatcagccagccgctggaa
accgacaacctcatcgacaagacggtgctcttgttcgagccgcgggagctatcacgcaag
gtccatgaaagcctgcttagccactggggcatgcaaaatatcagtataaccactgccgaa
gatctggcccgggtggccggcgaagaaggccgccacttcgactacgccatcatcagctgc
aacgatttggccagcagtcctaacctgttaaacgtgctcaataagatagccaagatcagc
gactacaccctttacctctgtagcagcacagacagcgccgccaagatgagcctgatccag
cccaacgtggacaaggtgatgcaggcgccggtgggcgagcgcgccctggccgtgaccctg
attaatccccaccgcgcccaatatgaggccatgcctttccaggaagcggtcaaagaaacc
caggagcgcgaacccatgagcgtgctggcggtggacgataaccccgccaacctcaagctg
attaagacgctgctcaaggagctggttactcaggtgacggtcacagacaacggccaggag
gcggtagagatcgccaaggccaagagcttcgatctcatcttcatggatattcagatgccg
ggcaccgacggctttagcgccaccaagcagatacgtgagcattcactcaatcgcaatacg
ccgattgtcgccgtgaccgcccacgccatcgccgaggagcgcgagcgcatcgatcagagc
ggcatggatggttacctgcccaagccaatcgatgaggcggcgctgaagagtgtgatcagc
cgctggaagacccggccgcagtttacccatttcgaccagcacaccctcaattgggatctc
tgcctgacccaagccaaccagaaaaccagtctggcgctggagatgctgcagatgctggtc
gactccctgcccgagacccgtgagcacatctcgggcgccctcgagcgtcaggacagccag
gccatggtcagtcatgtgcacaagctccacggcgccagctgctactgcggcgtgccgacc
actcagcgactctgtcgagagattgaacagtcactcaagcaaaatgccagtgtcgatctg
gtcgagccggaaatacttgagttacttgacgagctttctaaggtagaatcggccgcaaat
caagtaatagcccagttatctatggatgtgatcgatgagtaa
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