Shewanella loihica: Shew_1214
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Entry
Shew_1214 CDS
T00489
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
slo
Shewanella loihica
Pathway
slo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Shew_1214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slo03400
]
Shew_1214
DNA repair and recombination proteins [BR:
slo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Shew_1214
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ABO23084
UniProt:
A3QC86
LinkDB
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Position
complement(1408043..1410610)
Genome browser
AA seq
855 aa
AA seq
DB search
MNAVDTQYLEKHTPMMRQYLTLKAETPDMLLFYRMGDFYELFYDDAKRASELLGISLTAR
GKSGGDPIPMAGIPYHAVEGYLAKLVQLRVSVAICEQIGDPATTKGPVERKIVRIVTPGT
LTDEALLQERQDNLLAAVYHGKVGFGYATLDVSSGRFVVTELASKEALEAELQRTNPAEL
LYSEDFSEPALIASLSGKRRRPEWEFDYDTSYKLLLEQFGTKDLYGFGLGEVRLSLQAAG
CLIQYVKDTQRTALPHINAITRFNQCDSIVLDAATRKNLELTRNLQGGSDNTLASVLDNT
ATPMGSRMLQRWIHEPLRNHNIIRARHDAIDELLDNGYHESLHEQLKALGDIERITARLA
IRSARPRDFARLRQALALLPEIQQQLADCNSPHLKALSSHLGDFPEEHALLSRAIVDNPP
MLIRDGGVIKEGYHNELDEWRKLSQGATDYLAELEAREKAATGASTLKVGYNRVHGYYIE
VSRRESDLVPMSYQRRQTLKNTERYIVAELKEHEEKVLSSQGKALALEKQLWEELFDLLM
PRLHELQAFARAAAELDVITNFAERAEQLDYHRPELTAQSGIHIEAGRHPVVERVSQTPF
IANPVSLNPARRMLIVTGPNMGGKSTYMRQVALITLMAHIGSFVPAQKAAIGPVDRIFTR
IGAADDLASGRSTFMVEMTETANILHNATPESLVLMDEIGRGTSTYDGLSLAWSAAEHLA
QNLKSMTLFATHYFELTQLPDQMENVANVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVA
ALAGVPAKVVQAAKHKLHHLESRDREEELPELRQAQLSMTMPETSKALDRLDTIDPDSLT
PRQALDLLYELKQLR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcgatactcaatatcttgaaaagcacacccccatgatgcgtcaatatctg
acgctgaaagccgaaacacccgatatgttgcttttttatcgtatgggagatttttacgag
ctcttctacgacgatgctaagcgggcctcagagctgctggggatctccctgaccgctcgc
ggcaagagtggcggcgatcctatccccatggcaggcatcccctaccatgcggtagaaggc
tatcttgctaagcttgtgcagctcagggtatctgtggcgatctgcgagcagataggcgat
cccgccacgaccaaggggccggtagaacgtaagattgttcgcatcgtcaccccgggtacg
cttacagatgaggccctgctgcaggagcggcaggacaacctgctggccgccgtctatcac
ggcaaggtgggttttggttacgcgaccctggatgtctcatccgggcgcttcgtggtcacc
gaacttgccagcaaagaggcgcttgaagccgagctgcaacgcaccaatccagcggagctg
ctctacagcgaagatttcagcgagccggctttgatcgcctcgctgtcgggtaagcgtcgc
cgtcccgagtgggagttcgactacgacaccagctacaagctactgctggaacagttcggc
accaaagatctctacggctttggcctgggggaagtcaggttatcgctacaggcggccggc
tgtcttatccagtatgtgaaagatacccagcgtaccgccctgccccatatcaacgccatc
acccgcttcaatcagtgcgacagcatagtgctggatgcggccacccgtaagaatctggag
ctgacccgcaacctgcaaggcggtagcgacaacaccctggcctcggtactggataacacg
gcaactcccatgggcagccgtatgttgcagcgctggatccacgagccgctgcgcaaccac
aacatcatccgcgcccgtcatgatgccatagacgagctgctggacaacggctatcacgag
agcctgcatgaacagctaaaagccctcggcgacatagaacgtatcacggcgcgtctggcc
attcgtagtgcccgcccgcgtgactttgcccgtctgcgtcaggccctggccctgctgccc
gagatacagcagcagctggcagactgcaacagccctcacctcaaggcgctatcgagtcac
ctgggcgacttccccgaggagcatgccctgctaagccgcgccatcgtcgacaatccgcct
atgctgatccgcgacggcggcgtgatcaaagagggttatcacaacgagctggatgaatgg
cgcaaactcagccagggcgcgaccgactacctcgccgagctggaagcccgggagaaggca
gccaccggcgcctcgactctgaaggtgggctacaaccgggtgcacggctactacatagag
gtgagtcgccgcgagtcggatctggtgcctatgagctaccagcgcagacaaacccttaag
aacaccgagcgttacatagtcgccgagcttaaagagcatgaggagaaggtactctccagt
cagggcaaggcgctggcgctggagaaacagctgtgggaagagctgttcgatctattgatg
ccgcgcctgcacgagctacaggccttcgcccgcgcggcagcggagcttgatgtgatcacc
aactttgccgagcgcgccgagcagctcgattatcacagaccggaactcacggcccagagc
ggcatacatatcgaggcgggaagacacccagtggtcgagcgcgtcagtcagacgccgttt
atcgccaaccctgtcagcctcaacccggcaaggcgcatgctgatcgttaccggccctaac
atgggcggtaagtcgacctatatgcgccaggtggctctgatcacccttatggcccatata
ggtagcttcgtaccggcccagaaggccgccataggcccagtggatcgaatctttacccgt
attggcgcggcagacgatctcgcctccggccgctcgaccttcatggtggagatgacggaa
accgccaacatactacataacgcgacgcccgagagcctggtattgatggatgagattggc
cgcggcacctcgacctatgatggcttgtcgctggcctggtccgccgccgagcatctggcg
cagaacttaaaatctatgaccctgtttgccacccactattttgagctaacccagctgccg
gatcagatggaaaatgtggccaacgtgcacctcgacgccatagagcatgacgacaccatc
gccttcatgcacgcggtgcaggaaggtgcggcgagtaagagttatggccttcaagtcgcg
gcgctggctggtgttccggccaaggtggtgcaggcagccaagcacaagctgcatcatctt
gagagccgggatagagaggaggagctccctgaactgagacaggcccagctgagcatgacc
atgccggagacctcaaaggcgctggacaggttagataccatagatcccgacagcctgacg
ccgagacaggcgctggatcttctctatgagctcaagcagctacgctaa
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