Shewanella loihica: Shew_1220
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Entry
Shew_1220 CDS
T00489
Name
(GenBank) oxaloacetate decarboxylase alpha subunit
KO
K01571
oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:
7.2.4.2
]
Organism
slo
Shewanella loihica
Pathway
slo00620
Pyruvate metabolism
slo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Shew_1220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1220
Enzymes [BR:
slo01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.2 oxaloacetate decarboxylase (Na+ extruding)
Shew_1220
Transporters [BR:
slo02000
]
Other transporters
Primary active transporters [TC:
3
]
Shew_1220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
HlyD_3
HlyD_D23
PTS_EIIA_1
YqfD
Motif
Other DBs
NCBI-ProteinID:
ABO23090
UniProt:
A3QC92
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All DBs
Position
1417554..1419359
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AA seq
601 aa
AA seq
DB search
MSKPLALTDVVLRDAHQSILATRLRIDDMLPIAPLLDKVGFWSLESWGGATFDACIRYLG
EDPWERIRELKKAMPNTPQQMLLRGQNLLGYRHYGDDLVHRFVERAHQNGVDVFRIFDAM
NDVRNLETAVKSVVEVGGHAQGTISYTTSPVHTLDTWVDMAKRLEDMGCHSLCIKDMAGL
LKPFDAFDLISQLKAQTNLIISMQCHATTGLSTATYQKAIEAGIDVLDTAISSMSQTYGH
SATETLVAMVEDTDRATGYDMALLEQIAAYFREVRKKYVAFEGELKGIDSRILRAQVPGG
MLTNMENQLREQGAADKLDLVLEEIPKVREDLGFIPLVTPTSQIVGTQAVINVLTGERYK
SLTKETEGVLKGEYGATPAPVNRELQARVLAGAEAICCRPADLLPAELDSLRAELSEKAA
SEQISLAAELDDDVLTYALFPQIGLKFLKNRDNPDAFEPKPEAPQATTQAATVSEPASAR
QPQGKETYTVNVQGQSFVVEVSPGGDISQIVPSENVVPFAAPEPVAPVVGEGSPMNAPLS
GNIFKVNVQPGDAVKAGDVVIILEAMKMETEIRAESDGVVAKVWVKEGDSVAVGNQLLAI
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccacttgcattaaccgacgtcgtcctgcgcgacgcgcatcaatcgattctt
gccacgcgtcttcgtatcgacgacatgcttcctatcgcccctttactcgacaaggtgggc
ttctggtcgctggaatcctggggcggtgctacttttgacgcctgtatccgttatctgggg
gaggatccctgggaacgcattcgcgagcttaagaaggccatgcccaatacgccgcagcag
atgttacttaggggacagaacctgctgggctatcgccactatggtgatgacctggtgcat
aggtttgtcgagcgcgcgcatcaaaatggtgtggacgtgttccgtatcttcgatgccatg
aatgatgtgcgtaacctagagacggcggttaagtctgtggtcgaggttggcggtcacgcc
cagggcaccatctcctacaccacaagtccggtacacaccttagatacttgggtggacatg
gctaagcgtctggaagatatgggctgtcactcgctctgtatcaaggatatggccggcctg
ctcaaacctttcgatgccttcgatctcatcagccagctcaaggcgcagactaacctgatc
atctctatgcagtgccacgccactacgggcctgagtacggcgacctatcaaaaggcgatt
gaagctggcatcgacgtgctcgacaccgctatctcttcgatgagccaaacctatggtcat
agcgctaccgagaccttggtggccatggtggaagataccgacagggccacgggttacgac
atggcgctgctcgagcagatcgccgcctacttcagagaggtgcgtaagaaatatgttgcc
ttcgaaggggagctcaaggggatcgattcgcgtattctgcgcgcccaggtgccaggtggc
atgctcaccaacatggagaatcaactgagagagcagggcgccgccgacaagttggatctt
gtgctcgaagagatccctaaggtgcgtgaagatcttggctttattccgttggttactccg
acatcacagatcgtcggtacccaggcggtgatcaacgtgctcacaggtgagcgttataag
tcgctcaccaaggaaaccgaaggtgtgctcaagggcgaatatggcgccacgcctgcgccg
gtaaatcgtgagctacaggctcgcgtgctggccggcgctgaggcgatctgctgtcgcccc
gcagacctgctgcccgccgagctggacagcctgagggccgaactaagcgagaaggccgcc
agcgagcagataagcctggcagctgagctggacgatgatgtcttgacctatgcgctcttc
ccgcagatcggccttaagttcctcaagaaccgtgataatccggatgcgttcgagcctaag
ccagaggcacctcaagccacaactcaagcagcgactgtaagcgagccagctagcgcgcgt
cagccacagggtaaggagacctatacggtcaatgtgcaaggccagagtttcgtggtggag
gtctctcccggcggcgatatcagtcagatagtgccgagcgagaatgtggtgccctttgcg
gcgccagagcccgtcgcacccgttgtaggcgaaggctcgcccatgaacgcacccttgtcg
ggcaacatcttcaaggtgaatgtgcagccaggggatgccgtcaaggcgggggatgtggtg
atcatcctcgaggcgatgaagatggagacagagatccgcgccgaatccgatggcgtagtc
gccaaggtgtgggtcaaagaaggcgactctgttgccgttggcaatcaattgcttgccatt
gcatag
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