Shewanella loihica: Shew_1276
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Entry
Shew_1276 CDS
T00489
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
slo
Shewanella loihica
Pathway
slo00630
Glyoxylate and dicarboxylate metabolism
slo00640
Propanoate metabolism
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
Module
slo_M00012
Glyoxylate cycle
slo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shew_1276
00640 Propanoate metabolism
Shew_1276
Enzymes [BR:
slo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Shew_1276
4.1.3.30 methylisocitrate lyase
Shew_1276
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Gene cluster
GFIT
Motif
Pfam:
ICL
PEP_mutase
Androglobin_IV
Motif
Other DBs
NCBI-ProteinID:
ABO23146
UniProt:
A3QCE8
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All DBs
Position
1475987..1477339
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AA seq
450 aa
AA seq
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MLTPEMEKIMTKATTQISRQQQIDAIKQDWAENPRWAGVRRPYSAEDVVALRGSIVPENT
LATRGAEKLWQLVNGGAKKGYVNSLGALTGGQAVQQAKAGIEAIYLSGWQVAADANLAGT
MYPDQSLYPANSVPAVVQRINNSFRRADQIQWSNEIDPQDERYTDYFLPIVADAEAGFGG
VLNAYELMKNMIDAGAAGVHFEDQLASVKKCGHMGGKVLVPTQEAVQKLVSARLAADVSG
VPTLVIARTDANAADLLTSDCDPYDRDFITGERTSEGFYRVNAGIDQAISRGLAYAPYAD
LIWCETAKPDLEEARRFAEAIHAQYPDQLLAYNCSPSFNWKKNLDDATIARFQQELSDMG
YKYQFITLAGIHNMWYNMFDLAYDYARGEGMKHYVEKVQEVEFAAAKKGYTFVAHQQEVG
TGYFDKVTNVIQGGESSVTALTGSTEEEQF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctaacacctgagatggagaagattatgactaaggcaactacacagatttcacgtcaa
caacagattgatgcgattaagcaagattgggctgaaaatccacgttgggccggcgttcgt
cgcccctattcagcagaggacgtagtggccttacgcggttcgattgtcccggaaaatacc
ctggcaacccgcggcgccgagaagctatggcagctggttaatggtggcgctaagaaaggt
tatgttaactcgctcggcgccctgaccggtggtcaggcggtacagcaggccaaggcgggt
attgaggccatctacctgtcgggctggcaggtagctgccgatgctaacctggcgggcacc
atgtacccagatcagtcgctttatccggctaactcagtacctgcagtggttcagcgcatc
aacaactcgttccgccgcgccgaccagatccagtggagcaacgagatcgacccacaagat
gagcgctacacagactacttcttgcctatcgtggccgatgccgaagccggttttggtggt
gtacttaacgcctacgagctgatgaagaacatgatcgatgccggcgcggcgggtgtgcac
tttgaagatcagctagcctcggtgaagaagtgtggccacatgggcggtaaggtgttggtg
ccgacccaagaagcggtacagaaactagtttcggcgcgtttggctgccgacgtgagcggc
gtaccaactctggttatcgcccgaaccgatgcgaacgctgcggatctgctgacctctgat
tgcgacccttatgatcgcgacttcatcaccggcgagcgcacttcagaaggtttctaccgt
gtgaatgcgggcattgaccaggctatctctcgtggtctggcctacgccccatacgcagat
cttatctggtgtgagacggctaagccggatcttgaagaggcgcgtcgctttgccgaggct
atccatgcgcaatacccagatcagctgctggcctacaactgttcaccttctttcaactgg
aagaagaacctggatgacgccaccatcgcccgcttccagcaggaactgtcggacatgggc
tacaagtaccagttcatcaccttagccggtattcacaacatgtggtacaacatgttcgac
ctcgcctatgactatgcgcgtggtgaaggcatgaagcactatgtcgagaaggtacaggaa
gtcgaattcgccgcggcgaagaaaggctacaccttcgtggcgcaccagcaagaggtgggt
acaggctacttcgataaggtgaccaatgtgatccaaggcggtgagtcttcggtcacggcg
ctgacaggctctaccgaagaggagcagttctaa
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