Shewanella loihica: Shew_1293
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Entry
Shew_1293 CDS
T00489
Name
(GenBank) Pyrrolo-quinoline quinone
KO
K17713
outer membrane protein assembly factor BamB
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1293
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_1293
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ_3
PQQ
Beta-prop_LRRK2
DUF6906
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
ABO23163
UniProt:
A3QCG5
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All DBs
Position
1493389..1494576
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AA seq
395 aa
AA seq
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MKSWCKTLLACSLSLGLLSACSSNDVEEEPVSPLPQIEASVFPEVSWSASVGSGVGDYYS
KIRPAVRYGKLFVMDRYGEVAAYDEATGEQVWSLEISSWFKEGALSKNKGARLSSGITAA
RNKVFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDD
GKQLWVYESKLPTLTLRGTGSAAYEAGGFFVGTADGKVAVVVKSNGQAAWEQPIYTPKGG
NEFTRMADVDMKPLIVGENIYAVSYNGNLVSMELRTGRVVWSRKYSSFNELASAGLNLYL
VDDHGRVYAVDKRNGLESWSNSELTNRELTSPVVFKDYLVVGDFEGYLHFIDRASGKLVG
RVEVDSSGLFSQPLVIDDKIYVQSRGGKVARITLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaacattactggcttgcagcttgagcctggggttgttgtcggcc
tgttcttctaacgatgttgaggaagagccggtaagtccgctgccgcagattgaggcgagc
gtcttccccgaggtcagctggagtgcttccgtcggcagtggtgtgggtgactactactct
aagatccgtccggcggtgcgttacggcaagctgttcgtcatggatcgttacggtgaagtc
gccgcctacgatgaagccacaggtgagcaggtctggtcgctggagatcagctcctggttc
aaagagggcgccttgtctaagaacaagggcgcgcgtctctcctcaggcattaccgctgcc
cgtaacaaggtgttcttcggtggtgagagtggcctgctgggcgccgtcgatgccgaaacc
ggcgagatggtctggcatgtgaccgcgggcggtgagctgctgtcggcgccaactgtaggc
gaagatgtagtggtggttcacaccagcacgggcgctctggaagcctataacgtcgatgac
ggcaaacagctgtgggtctacgagagcaagttgccaaccctgaccctaaggggcacaggt
tctgctgcctatgaggccggaggtttcttcgtcggcaccgccgatggcaaggtcgcggtt
gtggtgaaaagcaacggtcaggccgcctgggagcagcctatctatacgccaaaggggggt
aacgagtttacccgcatggccgacgtggatatgaagccgcttatcgtgggcgagaacatc
tacgcggtgagctacaacggtaacctggtctccatggagctgcgtacaggccgtgtggtc
tggagtcgtaaatattctagcttcaacgagttggcctcggccggtctgaacctttacctg
gtcgatgaccacggccgtgtgtatgcggtcgataagcgtaacggacttgaaagctggagc
aacagcgagctgactaaccgcgaattgacctcaccagtggtcttcaaagactacctggtg
gtgggtgatttcgaaggctatctgcatttcatcgatcgcgcctcaggcaagctggtgggc
cgcgtcgaagtggatagttcaggtttatttagccagccactggtaatagatgataagatc
tacgtccagagtcgcggcggcaaggtagcaagaattacgcttccctaa
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