Shewanella loihica: Shew_1444
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Entry
Shew_1444 CDS
T00489
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_1444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1444
Transporters [BR:
slo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shew_1444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABO23311
UniProt:
A3QCW3
LinkDB
All DBs
Position
complement(1660596..1661993)
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AA seq
465 aa
AA seq
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MTIATLFISLFLCMLLGMPIAIALGFSSMLTILLFSDDSLASVALKLYESTSEHYTLLAI
PFFILSSAFLSTGGVARRIIDFAMDSVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIG
SIVIVGMVRAGYPEKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGL
MMGLLLMLAIYIVARIKKLPSRPFPGFRPLAISSAKAMGGLALIVIVLGSIYGGIASPTE
AAAVACVYAYFIAVFGYRDIGPLKNVSWRDSGEPLIRAILRNLGFMVLAVFKTPADKEIR
HVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHLIAETIVGMGLPVWGFLIIVNLLLLA
AGNFMEPSAILLIMAPILFPIATQLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGIT
GRSMGWVIHSCIPWLALLLFFLALITYIPQISLFLPEYIDKLNGY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactatagcaaccctctttatcagcctgtttctctgtatgctgctaggcatgccgatc
gccatcgccctcggcttctccagcatgttgaccatattactcttctccgatgactcactg
gcctcggtcgccttgaaactctatgagtccacctcggagcactacacactactggcgatc
cccttcttcattctgtcgtcggcgtttctctccaccggcggcgtcgccaggcgcatcatc
gactttgccatggacagtgtaggtcatattcgcggtggtctcgccatggcctctgtcatg
gcctgtatgttgtttgccgcggtatctggctcatcccccgccacggttgccgccatcggc
tctatcgttatcgtcggcatggttcgcgccggctaccctgaaaagtttgccgcaggggtg
atcaccacctcaggtacgctagggattttgatcccgccttctatcgttatgctggtctac
gcggcggcaacggaagtctcggcggcgcgtatgttcatggcggggcttatccccggtctg
atgatgggactcttgttgatgctcgccatctatatcgtggcccgcatcaagaagctgcct
tcccgtcccttccccggttttcgtcccctggccatatcgagcgccaaggcgatgggcggc
ctggcgcttatcgttatcgtgctcggctccatctatggcggtatcgccagcccgaccgag
gcggcggcggttgcctgcgtctacgcctatttcatcgcggtatttggttatcgtgatatc
ggcccgctgaaaaatgtcagctggcgtgatagcggcgagccgctgatcagagccatactc
cgtaacctgggtttcatggtgctggcggttttcaagaccccagccgacaaggagatccgc
cacgtggtgcgcgatggtgccaaggtcagcatcatgctgctgttcatcatagccaacgcc
atgctgttcgcccacgtgctcaccacagagcgcattccgcacctaattgccgagaccata
gtgggcatgggactgccggtatggggcttcctcatcatagtcaacttgctgctgctggca
gcgggtaactttatggaaccatcggccatcttgttgatcatggcgcctatcttgttcccg
atcgccacccagctggggatagaccctatccacctagggatcatcatggtggtgaacatg
gagataggcatgttgacgccgcctgtgggactcaacctgtttgtgaccgcggggatcacc
ggccgcagcatgggatgggtgatccactcctgtatcccttggctggcgctgctgctcttc
ttcctggcgctgatcacttatattccgcagatctctctgttcctgccggaatatattgat
aagttaaacggttattaa
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