Shewanella loihica: Shew_1446
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Entry
Shew_1446 CDS
T00489
Name
(GenBank) TRAP dicarboxylate transporter, DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_1446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1446
Transporters [BR:
slo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shew_1446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ABO23313
UniProt:
A3QCW5
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1662719..1663729)
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AA seq
336 aa
AA seq
DB search
MTRLNTCTFIKQIVKMTSIAALLGASLNSWAAPTEIKFSHVVAENTPKGQMALKFKQLVE
ERLPGEYQVNVFPNSQLFGDNNELSALLLNDVQFVAPSLSKFERYTKKLQLFDLPFLFKD
MDAVNRFQQSDAGQQLLNSMKRKGVVGLGYLHNGMKQFSASSPLVLPEDAQGKKFRIMAS
DVLAAQFQAVEAIPVKKPFSEVFTLLQTRAIDGQENTWSNIYSKKFYEVQSNITESNHGV
LDYMVVTSNTFWKSLPADKRKVIKASLDEAIAYGNEIAAAKVNKDKQAIIDSKRSEVTYL
TPEQRAAWVNAMKPVWAQFEDKIGKDLIDAAVASNE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaccagactcaacacctgtacctttatcaaacagatcgtcaagatgacctcaatcgcg
gcccttctgggtgccagcttaaacagctgggcggcgccaacggaaattaagttttcccat
gtggtggccgaaaatactcctaaaggccaaatggcattgaagttcaagcaactagtagaa
gagcgtctacccggtgagtaccaggtaaacgtgttcccaaactctcagctgtttggtgac
aacaacgagctctccgccctgctactaaacgacgtgcagtttgtggcaccatcgctctcc
aagttcgagcgctacaccaagaagctgcagctattcgatctacctttcctcttcaaagac
atggacgccgttaaccgtttccaacagagcgacgccggccagcaactgctgaactcgatg
aagcgtaagggcgtcgtcggcctgggttacctgcacaatggtatgaagcagttctcggcc
agtagcccgcttgtcctgccagaagatgcccagggtaagaagttccgtatcatggcctca
gacgtgttggcggcccagttccaggcggtcgaagctattccggtgaagaagcccttctct
gaagtcttcaccctattgcaaacccgcgccatcgatggtcaggaaaacacctggtctaac
atctactcgaagaagttctacgaagtacagagcaacatcacagagagtaaccacggtgtg
ctcgattacatggtggtcacctcaaacaccttctggaagtcgctacccgccgacaagcgc
aaggtgatcaaggcatcgctggatgaagccattgcctatggtaatgagatcgccgcggct
aaagtgaacaaagacaagcaggcaatcatcgactctaagcgttctgaggtcacctacctg
acgccagagcagcgcgccgcctgggtcaacgccatgaaaccagtatgggcacagttcgaa
gataagataggtaaagatcttatcgatgccgccgttgcctcaaacgaataa
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