Shewanella loihica: Shew_1657
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Entry
Shew_1657 CDS
T00489
Name
(GenBank) succinyl-CoA synthetase (ADP-forming) beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
slo
Shewanella loihica
Pathway
slo00020
Citrate cycle (TCA cycle)
slo00640
Propanoate metabolism
slo00660
C5-Branched dibasic acid metabolism
slo00720
Other carbon fixation pathways
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
Module
slo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
slo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shew_1657
00640 Propanoate metabolism
Shew_1657
00660 C5-Branched dibasic acid metabolism
Shew_1657
09102 Energy metabolism
00720 Other carbon fixation pathways
Shew_1657
Enzymes [BR:
slo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Shew_1657
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
ABO23524
UniProt:
A3QDH6
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All DBs
Position
1906416..1907582
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AA seq
388 aa
AA seq
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MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGHIGGDMWVVKCQVHAGGRGKAGGV
KVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRR
VVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKV
FMGLATMFTDHDFALLEINPLVITTEGNIHCLDGKIGIDGNALFRQPKIRDMHDPSQDDA
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE
AFKIILSDANVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLEGTNADLGREV
LANSGLDIIAAESLTDAAVKVVAAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatgagtatcaggcaaaagccctatttgccgaatatggtttaccagtgtca
gaaggttatgcttgtgatacccctcaagaggcggtagaagcggctggccatattggcgga
gatatgtgggttgttaagtgtcaagtacacgcaggcggccgtggtaaagcaggtggcgtt
aaagttaccggcgataaagaagagatcagagcatttgctgagcattggttaggtaagaac
ctagtaacttatcagactgacgaaaaaggtcagccagttgctaagatcctagtcgaaagc
tgcactgatatcgcaaacgagctgtacctaggtgccgttgttgaccgtgcgacccgtcgc
gttgtcttcatggcgtctaccgaaggtggcgttgagattgaaacagttgccgaagagaca
cctgagctgatccacaaggcgattatcgatcctttgacaggtcctcagccttaccaggca
cgcgatcttggcttcaagttgggtctgaacccaactcagatgaagcagttcactaaagtc
ttcatgggtctggcgactatgttcaccgatcacgacttcgcactgcttgagatcaaccct
ctggttatcaccaccgaaggcaacatccactgtctagacggtaagattggtatcgatggc
aacgcactgttccgtcaaccaaagatccgtgacatgcacgatccatcacaggatgacgct
cgtgaagctcacgcggcgaaattcgagctgaactatgttgccctagacggtaacgtaggc
tgcatggtaaacggtgccggcctagcaatgggtactatggacatcgttaacctgcacggt
ggcaagccagctaacttcctggacgttggtggcggcgcgactaaagagcgtgttgctgaa
gcattcaagatcatcttgtctgacgctaacgtgaaagcggttctggttaacatcttcggt
ggtatcgtacgttgtgacatgatcgcagaaggtatcattggtgccgttaaagaagtgggt
gttgaagtgccagtggttgttcgtctagaaggtactaacgcagatctaggtcgcgaagta
ttggctaactctggtcttgacattattgcagccgagtcgctaaccgacgctgctgttaaa
gttgttgctgctgcggagggcaaataa
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