Shewanella loihica: Shew_1858
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Entry
Shew_1858 CDS
T00489
Name
(GenBank) DegT/DnrJ/EryC1/StrS aminotransferase
KO
K19715
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:
2.6.1.109
]
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Shew_1858
Enzymes [BR:
slo01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.109 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase
Shew_1858
Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Lipid A
Shew_1858
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABO23724
UniProt:
A3QE26
LinkDB
All DBs
Position
complement(2137104..2138291)
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AA seq
395 aa
AA seq
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MPGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTREMEQLLCEKMNVKHAHLLSS
GTAALQTALAAAGIGAGDEVIVPPFTFVASVEAVFMAGAVPVFAEIDETLCLSPEGIEAA
ITPRTKAVNLVHMCGSMAKMDEIKAICEKHNLVLLEDACQAIGGSYKGQALGTIGDVGCY
SFDSVKTITCGEGGAVITNDETIYNHAHMFSDHGHDHVGNDRGAESHPIMGLNFRISEMN
SALGLAQLRKLDTIIDIQRKNKKLLKDAMAELPEVSFREIPDPEGDSAGFLSFMLPTEAR
TQEISKKLAENGVDGCFYWYVNNWHYLSNWKHIQELKSPAALPITLIADKPDYTQVSVPK
SDAIMSRTISMLIKLSWTEEEIAQRIENIKRAFAA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttttgaattatttggtcctgaagagaagcaggaagttgctgacgtaatggaa
aacggttttaccttccgttacaactttgatcacatgcgtaacgaccgctggaagacgcgt
gagatggagcaactgctctgcgagaagatgaatgtcaaacacgcccacctgctctcgagc
ggtaccgctgccctgcagacggcactggccgccgcaggtataggcgcaggcgatgaagtg
atcgttcctccctttaccttcgtggcctctgtcgaagccgtattcatggccggcgccgtt
cccgtatttgccgagatcgacgagaccctgtgtctgtcaccagaaggcattgaagccgct
attacccctcgtaccaaggcagtaaacctggtacacatgtgtggctctatggccaagatg
gatgagatcaaggctatctgtgagaagcacaacctggtgctgctggaagatgcctgtcag
gccatcggcggtagctacaagggtcaggcactgggcactatcggtgacgtaggctgctac
tctttcgattctgttaagaccatcacctgtggtgaaggcggcgcggtgatcaccaatgat
gagaccatctataaccacgcccatatgttctctgaccatggccacgaccatgtcggtaac
gatcgcggcgcagagagtcaccctatcatgggtctgaacttccgcatctctgagatgaac
tcggcgcttggccttgcgcagctgcgtaagctagataccatcatcgacatccagcgcaag
aacaagaagctgcttaaagatgccatggccgagctgccagaggtgagcttccgcgagatc
ccggatccagaaggtgactcagcaggcttcctaagcttcatgctgcctaccgaggcccgc
acccaagagatcagcaaaaaactggccgaaaacggcgttgacggctgcttctactggtat
gtgaacaactggcactacctgtcaaactggaaacacattcaagagcttaaatcaccagcc
gctctgccgatcacattaattgccgacaaacctgactatactcaggtgtctgtgcctaag
tctgatgccatcatgagccgcaccatttcgatgttgatcaagctctcttggactgaagaa
gagatcgcccagcgcatcgagaacatcaagcgtgccttcgccgcttaa
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