Shewanella loihica: Shew_1862
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Entry
Shew_1862 CDS
T00489
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
slo
Shewanella loihica
Pathway
slo00300
Lysine biosynthesis
slo01100
Metabolic pathways
slo01120
Microbial metabolism in diverse environments
slo01230
Biosynthesis of amino acids
Module
slo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Shew_1862
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slo01002
]
Shew_1862
Enzymes [BR:
slo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Shew_1862
Peptidases and inhibitors [BR:
slo01002
]
Metallo peptidases
Family M20
Shew_1862
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABO23728
UniProt:
A3QE30
LinkDB
All DBs
Position
complement(2140883..2142013)
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AA seq
376 aa
AA seq
DB search
MSQDVLTLAQDLIARASVTPLDEGCQPLMAKRLAAKGFNIEPMVFEDTTNMWARRGDQGP
LFCFAGHTDVVPVGDLNRWHTPPFEPVVIDGYLHGRGAADMKGSLAAMVVATERFVDKHP
DHKGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWSLVGEPSSTHKLGDIVKNGRRG
SLTGNLTVKGVQGHVAYPHLADNPIHKAAPALDELARMKWDNGNEFFPPTSFQIANINGG
TGASNVIPGSLEVMFNFRYSTEVTAEILIQRVLNILDAHGLDYDISWIFNGLPFLTDAGP
LLDATREAIYEITGTETDPQTSGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKVEDI
EQLAKVYERILEKLLC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggatgtcctcacgctggcccaggatctgattgccagagcctcggtcaccccg
ctagacgaaggttgtcagccactgatggccaaacgcctcgcggccaagggatttaatatc
gagcctatggtgtttgaagacaccaccaatatgtgggcgcgacgcggcgatcaaggcccg
ctgttttgctttgccggccatacggatgtggtgccagtgggcgatcttaatcgctggcac
acaccgcccttcgagcccgtggtgatcgacggctaccttcacggacgcggcgccgccgac
atgaaaggctcactggccgccatggtggtcgccaccgagcgtttcgtcgacaagcacccg
gatcacaaaggctccatcgcctttctgatcaccagcgacgaggaaggccccttcatcaac
ggtaccacgcgggtgatcgacaccctggaggcccgcaacgagaagatcacctggtctctg
gttggcgagccatcatctacccataagctgggggatatcgtcaagaatggccgtcgcggc
agcctcacgggtaacctcaccgtcaagggcgttcagggccatgtcgcctatccccatctg
gccgacaatcctatccacaaggcggcccccgccctggatgaactggcgcgcatgaaatgg
gacaacggcaacgagtttttcccgcctaccagttttcaaatcgccaatatcaatggcggc
actggcgcctcaaacgtgatcccgggtagcctggaggtgatgtttaacttccgctactcc
accgaagttaccgcggagatcttgatccagcgggttctcaacatcttagatgcccatgga
ctggactatgatatcagctggatcttcaacggcctgccgtttctcaccgacgcggggccg
ttgctggacgccacccgcgaagccatctacgagatcacgggcacagagaccgatccccag
acatcgggcggcacctcggatgggcgcttcatcgcccccacgggcgcccaggtgatcgag
cttggcccggttaacgctaccattcacaaggtgaacgagtgcgtcaaggtcgaggatatc
gagcagctggccaaggtgtatgaacgtatcctggaaaaactgctttgctaa
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