Shewanella loihica: Shew_1889
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Entry
Shew_1889 CDS
T00489
Name
(GenBank) alpha amylase, catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
slo
Shewanella loihica
Pathway
slo00052
Galactose metabolism
slo00500
Starch and sucrose metabolism
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Shew_1889
00500 Starch and sucrose metabolism
Shew_1889
Enzymes [BR:
slo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Shew_1889
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Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF3459
Alpha-amylase_C_2
SusG_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ABO23755
UniProt:
A3QE57
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All DBs
Position
2178964..2180589
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AA seq
541 aa
AA seq
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MNQLSWWRGAVIYQIYPRSLMDSNGDGVGDLQGIISKLDYIASLNVDAIWISPFFKSPMK
DFGYDISDYRAIDPLFGTMADFDELIDKAHGLGIKVIIDQVLSHTSDQHAWFSESRQSRD
NAKQDWYVWADPNPDGTAPNNWLAIFGGCAWEWEPRRQQYYLHNFLTSQPDLNFHNPDVR
QAVLDNVKFWLDKGVDGFRLDAITFCYHDEQLRDNPPKPEDKRQGRGFSEDNPYAYQYHY
YNNTRPQTVGFIEELRALINQYPGVVTLGEVSSEDSLATMAEYTQGDDRLHMAYSFELLT
DDFSPAYIRHTVEALEQSIGDGWPCWAIGNHDVQRVATRWGRDAFNSDMAKMLNAMLCSL
RGSVCSYQGEELGLGEVEIAYEQLQDPFGITFWPMFKGRDGCRTPMPWRHDANHAGFSDN
TPWLPVPADHKAVAVDVQEANPESILNHYRHMLAWRKLHPILVTGDIKFIESTDALLVFE
RRLGEQTLLVAFNLSGQPQSFSLAGLGDKALSPLEGHGLPKAELKGDLVQFDGFGCFYCW
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaactctcctggtggcgcggcgccgtcatctatcagatctatcctcgcagctta
atggattccaatggcgacggtgtaggtgatctacaaggcatcataagtaaactcgactac
attgcgagtctgaacgtggatgccatctggatctcgcctttcttcaagtcgccgatgaaa
gacttcggttacgacatcagtgactaccgcgctatcgatcctttgtttggcaccatggcg
gacttcgacgagctgatcgacaaggcgcacggcctcggcatcaaggtgattatcgatcag
gtgctcagccacacctcagatcaacacgcctggtttagcgagagccgccagagccgggat
aacgccaagcaggactggtatgtgtgggccgaccctaatccagatggcaccgcgcccaac
aactggctggctatcttcggtggctgtgcctgggagtgggagccacgtcgtcagcaatat
tatctgcataacttcctgaccagtcagccggatttgaacttccataaccctgacgtgcgc
caagctgtgctggataatgttaagttctggctcgacaagggagtcgatggtttccgcctc
gatgcgatcaccttctgctatcacgacgagcagctcagagacaatccgcctaagcctgaa
gacaagcgtcagggcaggggctttagcgaagacaacccttacgcctatcagtatcactac
tataacaacacccgcccgcagactgttggtttcatcgaagagctgcgcgcgctgatcaac
caatatcctggcgtcgtcaccctaggggaagtctcttcggaagactcgctggcgaccatg
gccgaatatacccagggtgacgatcgcctgcatatggcctacagcttcgagctgctgacc
gatgactttagcccggcctatattcgccacacggtagaggcgctggagcagagcattggc
gatggctggccctgctgggcgataggcaaccacgacgtgcaacgggtcgcgacacgttgg
ggcagagacgccttcaatagcgatatggccaagatgctcaacgctatgctctgttcgcta
cggggcagtgtctgtagctaccaaggtgaggagttgggtcttggcgaggtagagatcgcc
tatgagcagctgcaagatccgttcggcatcaccttctggcctatgttcaagggccgtgac
ggttgtcgcacgcctatgccttggcgccatgatgccaaccatgcaggcttcagtgacaac
acgccttggttgccggtaccggccgatcacaaagccgtggcggtcgatgtgcaggaggcc
aaccctgagtcgattctgaaccattaccgtcacatgctggcctggcgtaaactgcacccg
atactcgtcacaggtgatatcaaatttattgaatcaaccgatgcacttttggtgtttgag
cgtcgtctaggcgagcagaccctgctggttgcctttaacctgagtggtcagccgcagagc
tttagcctggcaggtctgggcgacaaagcgctgtcgccactggaaggccatggtctgcct
aaggccgagctgaaaggcgatctggttcagtttgacggtttcggttgtttctattgttgg
aagtaa
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