Shewanella loihica: Shew_2018
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Entry
Shew_2018 CDS
T00489
Name
(GenBank) DsrC family protein
KO
K11179
tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
Organism
slo
Shewanella loihica
Pathway
slo04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Shew_2018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slo03016
]
Shew_2018
Transfer RNA biogenesis [BR:
slo03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Shew_2018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DsrC
Motif
Other DBs
NCBI-ProteinID:
ABO23884
UniProt:
A3QEI6
LinkDB
All DBs
Position
2332261..2332584
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AA seq
107 aa
AA seq
DB search
MYGDSQIPTDPQGYLKNVSDWSEELAVLIATEEEITLTAAHWEVVHFVRDFYMEFKTSPA
IRVLVKAIGQKLGAEKGNSKYLYTLFPLGPAKQATKIAGLPKPAKCI
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcgatagtcagatccccacggatccccagggctatttgaaaaatgtcagcgac
tggagtgaagagctagcagtacttatcgccaccgaagaagagataacccttacagccgcc
cattgggaagtagtacatttcgtgcgtgatttctatatggaatttaagacaagcccggcc
attcgtgtgctggtcaaggcaataggccaaaaactcggtgccgaaaagggcaattcaaaa
tatctttataccctcttccctctcggcccggccaaacaggccactaagatcgcagggcta
cctaagccagccaagtgtatctaa
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