Shewanella loihica: Shew_2022
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Entry
Shew_2022 CDS
T00489
Name
(GenBank) AAA ATPase, central domain protein
KO
K07478
putative ATPase
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Shew_2022
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
AAA_16
AAA_5
AAA_30
AAA_22
Sigma54_activat
nSTAND3
AAA_19
AAA_14
AAA_2
DUF815
Parvo_NS1
Sigma54_activ_2
AAA_3
AAA_28
AAA_11
AAA_24
TniB
AAA_17
ABC_tran
NPHP3_N
IstB_IS21
RNA_helicase
AAA_33
MeaB
AAA_18
AAA_25
DUF5906
PhoH
SRP54
AAA_7
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
ABO23888
UniProt:
A3QEJ0
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Position
complement(2334482..2335813)
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AA seq
443 aa
AA seq
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MSSLSFDFAPDFRPLAARMRPETLSQYIGQDHLLGEGKPLRQALEAGRAHSMMFWGPPGT
GKTTLAELVAHYANAHVERISAVTSGVKEIRAAIEHAKSVAQSRGQRTLLFVDEVHRFNK
SQQDAFLPFIEDGTVIFIGATTENPSFEINNALLSRARVYLIKRLQDEEIIKIVRQALED
GERGLGKRQLKMPNEVAGKLASLCDGDARKALNLIELMSDMLPDGGEFNAQMLIEVAGQQ
LAGFDKNGDQYYDLISAVHKSIRGSAPDAALYWYCRMLEGGCDPLYVARRLLAIASEDIG
NADPVAMSVAVNAWECFHRVGPAEGERAIAQAVVYLACAPKSNAVYTAFKAARQLARETG
SQPVPNHLRNAPTQLMADIGLGEGYRYAHDEPNHYASGECYFPEQLAGTQFYYPSEHGFE
KRIKTKLATLAEMDRASEVKRYE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagcttaagtttcgatttcgcgccagacttccgcccgcttgccgcaagaatgcgg
ccggaaaccctgtcgcaatatatagggcaagatcatctgttaggtgagggtaagccgctg
cgtcaggccctcgaggccggcagggctcactccatgatgttctggggaccgccgggtacc
ggcaagaccacactcgccgagttggttgcccattatgccaatgctcatgtcgagcgcatc
tctgcggtcacctcaggggtgaaagagatccgcgccgccatcgagcacgccaagagtgtg
gcccagtcacgcgggcagcgcaccttgctgtttgtcgatgaggtgcacaggttcaacaag
agccagcaagatgccttcttgccctttatcgaagatggcactgtgatttttatcggtgcc
accacggaaaacccctcgtttgagatcaataacgcattgttatcccgcgccagggtctac
ctgatcaagcggttgcaagatgaggagatcatcaagatagtccgtcaggcgctggaagat
ggggagcgtggtctgggtaagcgtcagcttaagatgcctaatgaagtggcgggcaaactc
gctagcctctgtgatggtgatgcccgtaaggctcttaatcttatcgaattgatgagcgac
atgctgccggatggcggcgagtttaatgctcagatgctcatcgaggtggccgggcaacag
ctcgccggattcgataagaatggcgatcaatattacgaccttatctctgcggtgcataag
tcgattcggggctcggcgccggatgcggcgctttactggtattgccgcatgctcgaaggg
ggctgcgatcccttatatgtcgcccgtcgcctgctggccatcgcctcggaagatataggt
aatgccgatcctgtggccatgtcggtggcggtcaatgcctgggagtgctttcatcgcgtg
ggaccggccgaaggggagcgggcaattgcccaggcagttgtctacctcgcctgcgcgccc
aagagtaacgccgtctataccgccttcaaggcggcgcgccagctggcgcgggagaccggc
agtcagcccgtgcctaatcatctgcgcaatgccccaactcagttgatggccgatatcggc
ctgggtgaggggtatcgctacgcccatgatgagcccaatcattatgccagcggtgagtgt
tatttccctgagcagctagcaggcacacagttctactatcctagcgagcatggtttcgag
aagcgcatcaagaccaagctagccaccttggccgaaatggacagggcaagtgaggtgaaa
cgctatgaataa
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