Shewanella loihica: Shew_2075
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Entry
Shew_2075 CDS
T00489
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
slo
Shewanella loihica
Pathway
slo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shew_2075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slo03400
]
Shew_2075
Enzymes [BR:
slo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Shew_2075
DNA repair and recombination proteins [BR:
slo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shew_2075
RecFOR pathway proteins
Shew_2075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
AAA_3
AAA_14
AAA_22
nSTAND3
Mg_chelatase
AAA_17
Rad17
DUF815
Bac_DnaA
AAA_24
AAA_18
RNA_helicase
NB-ARC
NTPase_1
TsaE
AAA_25
NPHP3_N
NACHT
AAA_11
ATPase_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABO23941
UniProt:
A3QEP3
LinkDB
All DBs
Position
complement(2399610..2400623)
Genome browser
AA seq
337 aa
AA seq
DB search
MIEADRLVHAQPQGTEERDEQIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAQKRGEALDH
MLIYGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHR
LSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGALTSPLRARFGI
PLRLEFYNVKDLSSIVTRSAKVLELPIDQEGAVEVARRSRGTPRIANRLLRRVRDYAEVK
HDGEVNKVVAESALDMLDVDVEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETI
EDVLEPFLIQQGFIQRTPRGRIATARAYQHFNLIQPE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgataggttagttcacgcccagccccaaggcacagaggagcgggacgag
cagatagatagggcgatgcgtcctaagctgctggatgagtacacgggccaggacgatacc
agagcccagctcaaggtgtttatcgaggcggcgcagaagcgcggcgaggcccttgatcat
atgttgatctacggacctccaggcctgggtaagaccacgctcgccatgatcgtcgccaac
gagatgggggttaacatcaagtccacctcgggccctgtgctggagaaggcgggtgatctc
gcggccctgcttaccaatctcgaggccggtgacgtgctcttcatcgacgagatccacaga
cttagccctgtggtggaggagatcctctacccggcgatggaagactatcagctggatatc
atgataggcgagggcccggcggcgcgctccattaagcttgagctgcctccctttaccctg
attggtgcaactactcgcgccggcgcactgacatcgccgctgcgtgcccgttttggcatc
cccctgcgtctcgagttctataacgtcaaagatcttagcagtattgtcacgcgctcggcc
aaggtgcttgagctgccgatcgatcaagaaggcgcggtagaggtcgccagacgttctcgc
ggcacgccgcgtatcgctaaccgtttgcttagacgggtgcgagactacgccgaggtgaag
cacgatggcgaggtcaacaaggtggtcgccgagagcgctttggatatgctggatgtggat
gtcgaaggcttcgattatatggaccgtaagctgctgctggccatcatagataagtttatg
ggcggccctgtgggcctggataacctggccgcggccatcggcgaagagcgtgagactatc
gaagatgtgctcgaaccctttctgatccagcaaggcttcatccagcgcaccccaagaggg
cgtatcgcgacggcgagagcctatcagcacttcaacctgatccagccggaataa
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